RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PHOX2AO14813 284 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 LAGE3Q14657 143 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 TMEM136Q6ZRR5 245 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 RMI2Q96E14 147 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
SSBP3-208ENST00000444533 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 PSCAO43653 123 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 CRPP02741 224 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 ANGP03950 147 aaKnown RBP9.56□□□□□ -0.88
SSBP3-208ENST00000444533 RPS10P46783 165 aaKnown RBP9.56□□□□□ -0.88
SSBP3-208ENST00000444533 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 GAGE6Q13070 117 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 PRELID3AQ96N28 172 aa9.56□□□□□ -0.88
SSBP3-208ENST00000444533 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 TRBV27A0A0K0K1C4 114 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 PRSS29PA6NIE9 313 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 MT-ND6P03923 174 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 Q0VG73 95 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 NRACQ8N912 160 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 Q9HAA7 133 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
SSBP3-208ENST00000444533 H7C423 109 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 EREGO14944 169 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 RAB5AP20339 215 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
SSBP3-208ENST00000444533 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 GNB1LQ9BYB4 327 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
SSBP3-208ENST00000444533 RPL32P62910 135 aaKnown RBP9.53□□□□□ -0.88
SSBP3-208ENST00000444533 MPV17L2Q567V2 206 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 RYR2Q92736 4967 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 KMT2AQ03164 3969 aa9.53□□□□□ -0.88
SSBP3-208ENST00000444533 RTL8CO15255 209 aa9.52□□□□□ -0.89
SSBP3-208ENST00000444533 RBX1P62877 108 aa9.52□□□□□ -0.89
SSBP3-208ENST00000444533 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
SSBP3-208ENST00000444533 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
SSBP3-208ENST00000444533 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
SSBP3-208ENST00000444533 TSHBP01222 138 aa9.51□□□□□ -0.89
SSBP3-208ENST00000444533 NPYP01303 97 aa9.51□□□□□ -0.89
SSBP3-208ENST00000444533 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-208ENST00000444533 Q8N976 141 aa9.51□□□□□ -0.89
SSBP3-208ENST00000444533 SMCO4Q9NRQ5 59 aa9.51□□□□□ -0.89
SSBP3-208ENST00000444533 HYDINQ4G0P3 5121 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-208ENST00000444533 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-208ENST00000444533 FABP9Q0Z7S8 132 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 DGAT2L7PQ6IED9 249 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 Q8N3U1 123 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 RYR3Q15413 4870 aa9.5□□□□□ -0.89
SSBP3-208ENST00000444533 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
SSBP3-208ENST00000444533 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
SSBP3-208ENST00000444533 MIAQ16674 131 aa9.49□□□□□ -0.89
SSBP3-208ENST00000444533 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
SSBP3-208ENST00000444533 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
SSBP3-208ENST00000444533 TGIF2-C20orf24A0A0A6YYL0 155 aa9.48□□□□□ -0.89
SSBP3-208ENST00000444533 FGF6P10767 208 aa9.48□□□□□ -0.89
SSBP3-208ENST00000444533 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
SSBP3-208ENST00000444533 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
SSBP3-208ENST00000444533 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
SSBP3-208ENST00000444533 K7EMI3 77 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 ESDP10768 282 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 G0S2P27469 103 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 TNP2Q05952 138 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 REG3AQ06141 175 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
SSBP3-208ENST00000444533 TRAV8-4A0A0B4J246 113 aa9.46□□□□□ -0.9
SSBP3-208ENST00000444533 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
SSBP3-208ENST00000444533 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
SSBP3-208ENST00000444533 Q8N8P6 123 aa9.46□□□□□ -0.9
SSBP3-208ENST00000444533 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
SSBP3-208ENST00000444533 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
SSBP3-208ENST00000444533 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
SSBP3-208ENST00000444533 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-208ENST00000444533 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
SSBP3-208ENST00000444533 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
SSBP3-208ENST00000444533 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
SSBP3-208ENST00000444533 IGKV3OR2-268A0A0C4DH90 116 aa9.44□□□□□ -0.9
SSBP3-208ENST00000444533 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
SSBP3-208ENST00000444533 CBLN2Q8IUK8 224 aa9.44□□□□□ -0.9
SSBP3-208ENST00000444533 ALKBH7Q9BT30 221 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-208ENST00000444533 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
SSBP3-208ENST00000444533 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
SSBP3-208ENST00000444533 IFI27P40305 119 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-208ENST00000444533 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms