RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 MPV17L2Q567V2 206 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 Q8N3U1 123 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 ANAPC16Q96DE5 110 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 A0A087WTM6 91 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 F8W036 122 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 APCSP02743 223 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 HBBP68871 147 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 GAGE6Q13070 117 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 ST20Q9HBF5 79 aa6.94□□□□□ -1.3
HLA-DQB1-206ENST00000443574 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 CAMPP49913 170 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 IFITM2Q01629 132 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 MIAQ16674 131 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 AMN1Q8IY45 258 aa6.93□□□□□ -1.3
HLA-DQB1-206ENST00000443574 I3L3M4 83 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 RAB4AP20338 218 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 PMCHP20382 165 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 RBX1P62877 108 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 ATRAIDQ6UW56 229 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 Q8N976 141 aa6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 NTN5Q8WTR8 489 aaPredicted RBP6.92□□□□□ -1.3
HLA-DQB1-206ENST00000443574 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 LINC00862A6NCI5 91 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 H7C423 109 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 COMMD7Q86VX2 200 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 TMEM70Q9BUB7 260 aa6.91□□□□□ -1.3
HLA-DQB1-206ENST00000443574 A0A1B0GUV1 79 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 FCER1GP30273 86 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 CKS2P33552 79 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
HLA-DQB1-206ENST00000443574 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 A0A1B0GXF2 115 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TCAPO15273 167 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 PPBPP02775 128 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 SUMO2P61956 95 aaKnown RBP6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 REG3AQ06141 175 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 Q8N814 137 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TMEM242Q9NWH2 141 aa6.89□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 C7orf77A4D0Y5 90 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 VCYO14598 125 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 HLA-DQA1P01909 254 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 RNASEKQ6P5S7 137 aaKnown RBP6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IMMP2LQ96T52 175 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 C20orf78Q9BR46 151 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 CTDSP1Q9GZU7 261 aa6.88□□□□□ -1.31
HLA-DQB1-206ENST00000443574 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 ADCYAP1P18509 176 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 S100PP25815 95 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 ORMDL3Q8N138 153 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 NRACQ8N912 160 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 DEFB104AQ8WTQ1 72 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TMEM18Q96B42 140 aa6.87□□□□□ -1.31
HLA-DQB1-206ENST00000443574 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TRAV9-1A0A075B6T8 112 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IGKV2-29A2NJV5 120 aaPredicted RBP6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 D6R8Y8 96 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 PHOX2AO14813 284 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 LECT2O14960 151 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TSHBP01222 138 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 FGF6P10767 208 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 NDUFA5Q16718 116 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 BAALCQ8WXS3 180 aa6.86□□□□□ -1.31
HLA-DQB1-206ENST00000443574 LAMTOR2Q9Y2Q5 125 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms