RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
USP1-203ENST00000442679 TMEM242Q9NWH2 141 aa8.31□□□□□ -1.08
USP1-203ENST00000442679 I3L3M4 83 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 S100PP25815 95 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 AMTP48728 403 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 GAGE6Q13070 117 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 NRACQ8N912 160 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 Q9HAA7 133 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
USP1-203ENST00000442679 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
USP1-203ENST00000442679 TNP2Q05952 138 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 LAGE3Q14657 143 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 ELOBQ15370 118 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 ATRAIDQ6UW56 229 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
USP1-203ENST00000442679 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 KLK12Q9UKR0 248 aa8.29□□□□□ -1.08
USP1-203ENST00000442679 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 D6R8Y8 96 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 VCYO14598 125 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 MPV17L2Q567V2 206 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 SVBPQ8N300 66 aa8.28□□□□□ -1.08
USP1-203ENST00000442679 TRAV8-3A0A0A6YYJ7 113 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 UBE2L6O14933 153 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 SNAPINO95295 136 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 TSHBP01222 138 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 APCSP02743 223 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 PPBPP02775 128 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
USP1-203ENST00000442679 RBX1P62877 108 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 TMEM136Q6ZRR5 245 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 Q8N976 141 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 C20orf78Q9BR46 151 aa8.27□□□□□ -1.09
USP1-203ENST00000442679 TRBV24-1A0A075B6N3 115 aa8.26□□□□□ -1.09
USP1-203ENST00000442679 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
USP1-203ENST00000442679 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
USP1-203ENST00000442679 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
USP1-203ENST00000442679 UBE2WQ96B02 151 aa8.26□□□□□ -1.09
USP1-203ENST00000442679 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
USP1-203ENST00000442679 PSCAO43653 123 aa8.25□□□□□ -1.09
USP1-203ENST00000442679 FCER1GP30273 86 aa8.25□□□□□ -1.09
USP1-203ENST00000442679 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
USP1-203ENST00000442679 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
USP1-203ENST00000442679 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
USP1-203ENST00000442679 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
USP1-203ENST00000442679 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
USP1-203ENST00000442679 H7C423 109 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 PHOX2AO14813 284 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 NPYP01303 97 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
USP1-203ENST00000442679 Q0VG73 95 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 ENHOQ6UWT2 76 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 RMI2Q96E14 147 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
USP1-203ENST00000442679 IGLV4-60A0A075B6I1 120 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 CRPP02741 224 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 ESDP10768 282 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 AMMECR1LQ6DCA0 310 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
USP1-203ENST00000442679 EREGO14944 169 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 FGF6P10767 208 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 RNASEKQ6P5S7 137 aaKnown RBP8.22□□□□□ -1.09
USP1-203ENST00000442679 C20orf203Q8NBC4 194 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 LAMTOR2Q9Y2Q5 125 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
USP1-203ENST00000442679 A0A087WTM6 91 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 LOC389332A0A1B0GUA5 103 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 TCAPO15273 167 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 MIAQ16674 131 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 COX19Q49B96 90 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 CLPSL2Q6UWE3 100 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
USP1-203ENST00000442679 DYNC1H1Q14204 4646 aaKnown RBP8.21□□□□□ -1.1
USP1-203ENST00000442679 PKHD1P08F94 4074 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 REG3AQ06141 175 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 SPATA12Q7Z6I5 190 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 TMEM101Q96IK0 257 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 C1orf43Q9BWL3 253 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
USP1-203ENST00000442679 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
USP1-203ENST00000442679 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
USP1-203ENST00000442679 ZNF25P17030 456 aaPredicted RBP8.19□□□□□ -1.1
USP1-203ENST00000442679 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
USP1-203ENST00000442679 MT-ND6P03923 174 aa8.18□□□□□ -1.1
USP1-203ENST00000442679 RAB5AP20339 215 aa8.18□□□□□ -1.1
USP1-203ENST00000442679 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms