RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 K7EMI3 77 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 MRPS12O15235 138 aaKnown RBP4.76□□□□□ -1.65
HDAC6-210ENST00000441703 TCL1BO95988 128 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 IGLV1-40P01703 118 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 C5orf47Q569G3 176 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 RASL10AQ92737 203 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 PTH2Q96A98 100 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 SRSF8Q9BRL6 282 aaKnown RBP4.76□□□□□ -1.65
HDAC6-210ENST00000441703 TPPP3Q9BW30 176 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 MRPL20Q9BYC9 149 aaKnown RBP4.76□□□□□ -1.65
HDAC6-210ENST00000441703 KLK15Q9H2R5 256 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 TPSG1Q9NRR2 321 aa4.76□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV1-3A0A0C4DH29 117 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 LOC107984156A0A0G2JMH3 177 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 C16orf90A8MZG2 172 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 H3BTX0 84 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 P0DMU3 169 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 FAM231AP0DMU4 169 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 FAM231CP0DMU5 169 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 MRGPRG-AS1Q2M3A8 158 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 MEIG1Q5JSS6 88 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 ARL17AQ8IVW1 177 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 DNAJC30Q96LL9 226 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 OVOL2Q9BRP0 275 aa4.75□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV4-4A0A075B6R2 117 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV3-72A0A0B4J1Y9 119 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 TRAV8-2A0A0B4J237 113 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 TRAV8-4A0A0B4J246 113 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 TRAV4A0A0B4J268 109 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 SLC25A20O43772 301 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 NDUFA3O95167 84 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 CRYGBP07316 175 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
HDAC6-210ENST00000441703 RPL27AP46776 148 aaKnown RBP4.74□□□□□ -1.65
HDAC6-210ENST00000441703 LYZP61626 148 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
HDAC6-210ENST00000441703 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 FAM159AQ6UWV7 190 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 C10orf126Q8N4M7 172 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 NRACQ8N912 160 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 ODF3Q96PU9 254 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 LINC01587Q99440 93 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 AAMDCQ9H7C9 122 aa4.74□□□□□ -1.65
HDAC6-210ENST00000441703 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 FAM240AA0A1B0GVK7 77 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 G3V318 75 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 I3L2K1 104 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 RTL8CO15255 209 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 ATP6V0E1O15342 81 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 DUSP14O95147 198 aaKnown RBP4.73□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV3-48P01763 117 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 CFC1BP0CG36 223 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 CFC1P0CG37 223 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
HDAC6-210ENST00000441703 ERCC8Q13216 396 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 ORMDL2Q53FV1 153 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 TOMM6Q96B49 74 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 PRADC1Q9BSG0 188 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 PRO1854Q9UHT4 67 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 AGRNO00468 2067 aa4.73□□□□□ -1.65
HDAC6-210ENST00000441703 TMSB15BA0A087X1C1 80 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 TRAV41A0A0B4J266 112 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 A0A0J9YY99 117 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 TRBV7-7A0A0K0K1E9 115 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 TRBV10-2A0A0K0K1G8 114 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 A0A1B0GX51 115 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 IGKV1-17P01599 117 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV3-11P01762 117 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 RBMY1CP0DJD4 496 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 HERVK_113P61574 105 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 ATXN8Q156A1 80 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 C19orf54Q5BKX5 351 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 C10orf55Q5SWW7 151 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 SLC25A29Q8N8R3 303 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 SCGB3A1Q96QR1 104 aa4.72□□□□□ -1.65
HDAC6-210ENST00000441703 IGHV7-81A0A0B4J1V7 117 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 TRAV2A0A0B4J234 112 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 A0A0B4J2C4 111 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 RBAKDNA6NC62 111 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 C9JAW5 83 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 H3BVH4 76 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 M0R2N4 97 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 M0R2P5 195 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 LGALS9O00182 355 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 GAS8-AS1O95177 125 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 IGHV3-33P01772 117 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 ATP5G1P05496 136 aa4.71□□□□□ -1.66
HDAC6-210ENST00000441703 CRIP2P52943 208 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms