RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 SMR3AQ99954 134 aa9.7□□□□□ -0.86
ACTN4-204ENST00000440400 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
ACTN4-204ENST00000440400 IGHV3-16A0A0C4DH30 117 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 F8WDY8 70 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
ACTN4-204ENST00000440400 LINC00315P59091 139 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 HIVEP2P31629 2446 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 TCL1BO95988 128 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
ACTN4-204ENST00000440400 A8MWV9 139 aa9.68□□□□□ -0.86
ACTN4-204ENST00000440400 GNRH2O43555 120 aa9.68□□□□□ -0.86
ACTN4-204ENST00000440400 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
ACTN4-204ENST00000440400 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
ACTN4-204ENST00000440400 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
ACTN4-204ENST00000440400 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 DPH3P1Q9H4G8 78 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
ACTN4-204ENST00000440400 KRTAP10-3P60369 221 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 Q8N8P6 123 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 EDA2RQ9HAV5 297 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 SCGB1C2P0DMR2 95 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 RBMY1FQ15415 496 aaKnown RBP9.67□□□□□ -0.86
ACTN4-204ENST00000440400 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
ACTN4-204ENST00000440400 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
ACTN4-204ENST00000440400 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
ACTN4-204ENST00000440400 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
ACTN4-204ENST00000440400 TAL2Q16559 108 aa9.66□□□□□ -0.86
ACTN4-204ENST00000440400 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
ACTN4-204ENST00000440400 TRAV12-3A0A0B4J271 114 aa9.65□□□□□ -0.86
ACTN4-204ENST00000440400 DEFB131AP59861 70 aa9.65□□□□□ -0.86
ACTN4-204ENST00000440400 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
ACTN4-204ENST00000440400 PHLDA3Q9Y5J5 127 aa9.65□□□□□ -0.86
ACTN4-204ENST00000440400 TMEM262E9PQX1 116 aa9.65□□□□□ -0.87
ACTN4-204ENST00000440400 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.87
ACTN4-204ENST00000440400 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.87
ACTN4-204ENST00000440400 OTOGQ6ZRI0 2925 aa9.65□□□□□ -0.87
ACTN4-204ENST00000440400 IGLV1-51P01701 117 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
ACTN4-204ENST00000440400 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 RASL10AQ92737 203 aa9.64□□□□□ -0.87
ACTN4-204ENST00000440400 TRGV11A0A075B6L2 103 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 PLEKHB2Q96CS7 222 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 C9JAW5 83 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
ACTN4-204ENST00000440400 MRPL23Q16540 153 aaKnown RBP9.63□□□□□ -0.87
ACTN4-204ENST00000440400 Q8N1Y9 231 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 H7C2G1 150 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 PPP1R17O96001 155 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
ACTN4-204ENST00000440400 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 MUC4Q99102 2169 aa9.63□□□□□ -0.87
ACTN4-204ENST00000440400 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
ACTN4-204ENST00000440400 ATP5LO75964 103 aa9.62□□□□□ -0.87
ACTN4-204ENST00000440400 C15orf53Q8NAA6 179 aa9.62□□□□□ -0.87
ACTN4-204ENST00000440400 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
ACTN4-204ENST00000440400 CD7P09564 240 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 SORL1Q92673 2214 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 UBE2D3P61077 147 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 UBE2D2P62837 147 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
ACTN4-204ENST00000440400 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 TRAV26-2A0A0B4J265 109 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 ZNF815PA8K554 130 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 SLC25A20O43772 301 aa9.61□□□□□ -0.87
ACTN4-204ENST00000440400 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 INAFM1C9JVW0 142 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
ACTN4-204ENST00000440400 CRYGDP07320 174 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 C14orf178Q8N769 122 aaPredicted RBP9.59□□□□□ -0.87
ACTN4-204ENST00000440400 LINC00482Q8N8I6 264 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 ATRQ13535 2644 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 LINC00694P0DN24 101 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 F8P00451 2351 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
ACTN4-204ENST00000440400 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
ACTN4-204ENST00000440400 PRADC1Q9BSG0 188 aa9.58□□□□□ -0.88
ACTN4-204ENST00000440400 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
ACTN4-204ENST00000440400 UBE2D1P51668 147 aa9.58□□□□□ -0.88
ACTN4-204ENST00000440400 LAGE3Q14657 143 aa9.58□□□□□ -0.88
ACTN4-204ENST00000440400 SUMO4Q6EEV6 95 aa9.57□□□□□ -0.88
ACTN4-204ENST00000440400 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
ACTN4-204ENST00000440400 SPRY2O43597 315 aa9.57□□□□□ -0.88
ACTN4-204ENST00000440400 INSP01308 110 aa9.57□□□□□ -0.88
ACTN4-204ENST00000440400 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
ACTN4-204ENST00000440400 EMP1P54849 157 aa9.57□□□□□ -0.88
ACTN4-204ENST00000440400 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms