RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
SMAD3-202ENST00000439724 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
SMAD3-202ENST00000439724 E9PLD3 99 aa8.42□□□□□ -1.06
SMAD3-202ENST00000439724 WIPF1O43516 503 aa8.42□□□□□ -1.06
SMAD3-202ENST00000439724 COTL1Q14019 142 aa8.42□□□□□ -1.06
SMAD3-202ENST00000439724 TRBV7-3A0A075B6L6 115 aa8.41□□□□□ -1.06
SMAD3-202ENST00000439724 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
SMAD3-202ENST00000439724 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
SMAD3-202ENST00000439724 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
SMAD3-202ENST00000439724 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
SMAD3-202ENST00000439724 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 GAGE7O76087 117 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 SEC11AP67812 179 aa8.4□□□□□ -1.06
SMAD3-202ENST00000439724 RPL36AP83881 106 aaKnown RBP8.4□□□□□ -1.06
SMAD3-202ENST00000439724 RPL36ALQ969Q0 106 aaKnown RBP8.4□□□□□ -1.06
SMAD3-202ENST00000439724 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
SMAD3-202ENST00000439724 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 HERVK_113P61574 105 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 KIR2DL5BQ8NHK3 375 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 PHLDA1Q8WV24 401 aaPredicted RBP8.39□□□□□ -1.07
SMAD3-202ENST00000439724 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 AMELXQ99217 191 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 VCX2Q9H322 139 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 JMJD1CQ15652 2540 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 UBE2D3P61077 147 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 UBE2D2P62837 147 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 DAZ4Q86SG3 579 aaKnown RBP8.39□□□□□ -1.07
SMAD3-202ENST00000439724 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 PRADC1Q9BSG0 188 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 DAZ3Q9NR90 486 aaKnown RBP8.39□□□□□ -1.07
SMAD3-202ENST00000439724 X6R8D5 127 aa8.39□□□□□ -1.07
SMAD3-202ENST00000439724 F8P00451 2351 aa8.38□□□□□ -1.07
SMAD3-202ENST00000439724 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
SMAD3-202ENST00000439724 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-202ENST00000439724 EMP1P54849 157 aa8.38□□□□□ -1.07
SMAD3-202ENST00000439724 APOC4P55056 127 aa8.37□□□□□ -1.07
SMAD3-202ENST00000439724 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
SMAD3-202ENST00000439724 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
SMAD3-202ENST00000439724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-202ENST00000439724 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-202ENST00000439724 TAL2Q16559 108 aa8.36□□□□□ -1.07
SMAD3-202ENST00000439724 KRTAP24-1Q3LI83 254 aa8.36□□□□□ -1.07
SMAD3-202ENST00000439724 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
SMAD3-202ENST00000439724 ZMAT5Q9UDW3 170 aaKnown RBP8.36□□□□□ -1.07
SMAD3-202ENST00000439724 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 A6NDN8 102 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 TAX1BP3O14907 124 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-202ENST00000439724 GAGE1Q13065 139 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 GAGE4Q13068 117 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 GAGE5Q13069 117 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 FHL2Q14192 279 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
SMAD3-202ENST00000439724 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-202ENST00000439724 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 Q6ZUT4 128 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 SBSPONQ8IVN8 264 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
SMAD3-202ENST00000439724 ZNF815PA8K554 130 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 LINC00694P0DN24 101 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 TM2D2Q9BX73 214 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.08
SMAD3-202ENST00000439724 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.08
SMAD3-202ENST00000439724 LYRM9A8MSI8 78 aa8.33□□□□□ -1.08
SMAD3-202ENST00000439724 LEPROTO15243 131 aa8.33□□□□□ -1.08
SMAD3-202ENST00000439724 Q6ZVH6 145 aa8.33□□□□□ -1.08
SMAD3-202ENST00000439724 CEND1Q8N111 149 aa8.33□□□□□ -1.08
SMAD3-202ENST00000439724 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 H3BRM9 83 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 GCSHP23434 173 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 DEFB135Q30KP9 77 aa8.32□□□□□ -1.08
SMAD3-202ENST00000439724 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
SMAD3-202ENST00000439724 H7C423 109 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 J3QQQ9 107 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 DEFB130BP0DP73 79 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 DEFB130AP0DP74 79 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 UBE2D1P51668 147 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 FXYD2P54710 66 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms