RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 UBE2L6O14933 153 aa15.86■□□□□ 0.13
CPNE1-217ENST00000439669 HSPG2P98160 4391 aa15.86■□□□□ 0.13
CPNE1-217ENST00000439669 RIGQ13278 110 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 MIAQ16674 131 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 LINC00269Q8N2A0 174 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 NUP35Q8NFH5 326 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 KRTAP17-1Q9BYP8 105 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 TMEM191AQ9H0A3 160 aa15.85■□□□□ 0.13
CPNE1-217ENST00000439669 NAT8BQ9UHF3 227 aa15.84■□□□□ 0.13
CPNE1-217ENST00000439669 APOBP04114 4563 aaKnown RBP15.84■□□□□ 0.13
CPNE1-217ENST00000439669 RAB14P61106 215 aa15.83■□□□□ 0.12
CPNE1-217ENST00000439669 KRTAP4-5Q9BYR2 181 aa15.83■□□□□ 0.12
CPNE1-217ENST00000439669 PRR34Q9NV39 138 aa15.83■□□□□ 0.12
CPNE1-217ENST00000439669 SDHAF1A6NFY7 115 aa15.82■□□□□ 0.12
CPNE1-217ENST00000439669 HLA-DQA1P01909 254 aa15.82■□□□□ 0.12
CPNE1-217ENST00000439669 AMN1Q8IY45 258 aa15.82■□□□□ 0.12
CPNE1-217ENST00000439669 Q8N1X5 172 aa15.82■□□□□ 0.12
CPNE1-217ENST00000439669 XGP55808 180 aa15.81■□□□□ 0.12
CPNE1-217ENST00000439669 C20orf203Q8NBC4 194 aa15.81■□□□□ 0.12
CPNE1-217ENST00000439669 RNF185Q96GF1 192 aa15.81■□□□□ 0.12
CPNE1-217ENST00000439669 IGLV4-60A0A075B6I1 120 aa15.8■□□□□ 0.12
CPNE1-217ENST00000439669 A0A1B0GUV1 79 aa15.8■□□□□ 0.12
CPNE1-217ENST00000439669 GAS8-AS1O95177 125 aa15.8■□□□□ 0.12
CPNE1-217ENST00000439669 REG3AQ06141 175 aa15.8■□□□□ 0.12
CPNE1-217ENST00000439669 NCR2O95944 276 aa15.79■□□□□ 0.12
CPNE1-217ENST00000439669 APCSP02743 223 aa15.79■□□□□ 0.12
CPNE1-217ENST00000439669 RAB4AP20338 218 aa15.79■□□□□ 0.12
CPNE1-217ENST00000439669 MRAP2Q96G30 205 aa15.79■□□□□ 0.12
CPNE1-217ENST00000439669 TRBV6-5A0A0K0K1A5 114 aa15.78■□□□□ 0.12
CPNE1-217ENST00000439669 SMIM27A0A1W2PRY6 76 aa15.78■□□□□ 0.12
CPNE1-217ENST00000439669 PMCHP20382 165 aa15.78■□□□□ 0.12
CPNE1-217ENST00000439669 C14orf177Q52M58 125 aa15.78■□□□□ 0.12
CPNE1-217ENST00000439669 ST20Q9HBF5 79 aa15.78■□□□□ 0.12
CPNE1-217ENST00000439669 I3L3M4 83 aa15.77■□□□□ 0.12
CPNE1-217ENST00000439669 TMEM70Q9BUB7 260 aa15.77■□□□□ 0.12
CPNE1-217ENST00000439669 IGLV10-54A0A075B6I4 117 aa15.76■□□□□ 0.11
CPNE1-217ENST00000439669 RPS10P46783 165 aaKnown RBP15.76■□□□□ 0.11
CPNE1-217ENST00000439669 HAMPP81172 84 aa15.76■□□□□ 0.11
CPNE1-217ENST00000439669 AMMECR1LQ6DCA0 310 aa15.76■□□□□ 0.11
CPNE1-217ENST00000439669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-217ENST00000439669 IGKV2-29A2NJV5 120 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-217ENST00000439669 USP17L23D6RBM5 183 aa15.75■□□□□ 0.11
CPNE1-217ENST00000439669 SMKR1H3BMG3 65 aa15.74■□□□□ 0.11
CPNE1-217ENST00000439669 CAMPP49913 170 aa15.74■□□□□ 0.11
CPNE1-217ENST00000439669 RNASEKQ6P5S7 137 aaKnown RBP15.74■□□□□ 0.11
CPNE1-217ENST00000439669 TMEM242Q9NWH2 141 aa15.74■□□□□ 0.11
CPNE1-217ENST00000439669 TRAV8-4A0A0B4J246 113 aa15.73■□□□□ 0.11
CPNE1-217ENST00000439669 LINC01620Q4KN68 170 aa15.73■□□□□ 0.11
CPNE1-217ENST00000439669 KRTAP26-1Q6PEX3 210 aa15.73■□□□□ 0.11
CPNE1-217ENST00000439669 FAM30AQ9NZY2 134 aa15.72■□□□□ 0.11
CPNE1-217ENST00000439669 PCLOQ9Y6V0 5065 aa15.71■□□□□ 0.11
CPNE1-217ENST00000439669 IGKV3OR2-268A0A0C4DH90 116 aa15.71■□□□□ 0.11
CPNE1-217ENST00000439669 A0A1B0GW15 77 aa15.71■□□□□ 0.11
CPNE1-217ENST00000439669 H7C423 109 aa15.71■□□□□ 0.11
CPNE1-217ENST00000439669 TSHBP01222 138 aa15.71■□□□□ 0.11
CPNE1-217ENST00000439669 MRPL54Q6P161 138 aaKnown RBP15.71■□□□□ 0.11
CPNE1-217ENST00000439669 EPM2AB3EWF7 344 aa15.7■□□□□ 0.1
CPNE1-217ENST00000439669 PPP1R17O96001 155 aa15.7■□□□□ 0.1
CPNE1-217ENST00000439669 FGF6P10767 208 aa15.7■□□□□ 0.1
CPNE1-217ENST00000439669 CLLU1Q5K131 121 aa15.7■□□□□ 0.1
CPNE1-217ENST00000439669 FAM104BQ5XKR9 115 aa15.7■□□□□ 0.1
CPNE1-217ENST00000439669 POLR2KP53803 58 aaKnown RBP15.69■□□□□ 0.1
CPNE1-217ENST00000439669 MRPL51Q4U2R6 128 aaKnown RBP15.69■□□□□ 0.1
CPNE1-217ENST00000439669 TRBV27A0A0K0K1C4 114 aa15.68■□□□□ 0.1
CPNE1-217ENST00000439669 PPP1R2P9O14990 202 aa15.68■□□□□ 0.1
CPNE1-217ENST00000439669 S100A8P05109 93 aa15.68■□□□□ 0.1
CPNE1-217ENST00000439669 HBBP68871 147 aa15.68■□□□□ 0.1
CPNE1-217ENST00000439669 SMR3BP02814 79 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-217ENST00000439669 SUMO2P61956 95 aaKnown RBP15.67■□□□□ 0.1
CPNE1-217ENST00000439669 PNRC1Q12796 327 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-217ENST00000439669 NRACQ8N912 160 aa15.67■□□□□ 0.1
CPNE1-217ENST00000439669 BTF3L4Q96K17 158 aa15.67■□□□□ 0.1
CPNE1-217ENST00000439669 VCYO14598 125 aa15.66■□□□□ 0.1
CPNE1-217ENST00000439669 PRSS1P07477 247 aa15.66■□□□□ 0.1
CPNE1-217ENST00000439669 ESDP10768 282 aa15.66■□□□□ 0.1
CPNE1-217ENST00000439669 ZNF25P17030 456 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-217ENST00000439669 FCER1GP30273 86 aa15.66■□□□□ 0.1
CPNE1-217ENST00000439669 TMEM101Q96IK0 257 aa15.66■□□□□ 0.1
CPNE1-217ENST00000439669 F8W036 122 aa15.65■□□□□ 0.1
CPNE1-217ENST00000439669 Q6ZSA8 131 aa15.65■□□□□ 0.1
CPNE1-217ENST00000439669 ABCA13Q86UQ4 5058 aa15.65■□□□□ 0.1
CPNE1-217ENST00000439669 A0A1B0GXF2 115 aa15.64■□□□□ 0.09
CPNE1-217ENST00000439669 C7orf77A4D0Y5 90 aa15.64■□□□□ 0.09
CPNE1-217ENST00000439669 CKS2P33552 79 aa15.64■□□□□ 0.09
CPNE1-217ENST00000439669 Q5VSD8 79 aa15.64■□□□□ 0.09
CPNE1-217ENST00000439669 OR5A1Q8NGJ0 315 aa15.64■□□□□ 0.09
CPNE1-217ENST00000439669 LINC00862A6NCI5 91 aa15.63■□□□□ 0.09
CPNE1-217ENST00000439669 GAGE12HA6NDE8 117 aa15.63■□□□□ 0.09
CPNE1-217ENST00000439669 KIR2DL4Q99706 377 aa15.63■□□□□ 0.09
CPNE1-217ENST00000439669 MT-ND4LP03901 98 aa15.62■□□□□ 0.09
CPNE1-217ENST00000439669 IFITM2Q01629 132 aa15.62■□□□□ 0.09
CPNE1-217ENST00000439669 CLRN3Q8NCR9 226 aa15.62■□□□□ 0.09
CPNE1-217ENST00000439669 ATP5L2Q7Z4Y8 100 aa15.61■□□□□ 0.09
CPNE1-217ENST00000439669 hDV102S1A0JD36 115 aa15.6■□□□□ 0.09
CPNE1-217ENST00000439669 D6R8Y8 96 aa15.6■□□□□ 0.09
CPNE1-217ENST00000439669 DGAT2L7PQ6IED9 249 aa15.6■□□□□ 0.09
CPNE1-217ENST00000439669 CHCHD10Q8WYQ3 142 aaPredicted RBP15.6■□□□□ 0.09
CPNE1-217ENST00000439669 ANAPC16Q96DE5 110 aa15.6■□□□□ 0.09
CPNE1-217ENST00000439669 C20orf78Q9BR46 151 aa15.6■□□□□ 0.09
CPNE1-217ENST00000439669 FAM229AH3BQW9 127 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms