RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 hCG_2014768A0A024R1R8 64 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 IGLV10-54A0A075B6I4 117 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 A8MWL6 223 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 J3QL48 77 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 K7EN84 100 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 PRSS1P07477 247 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 CEBPGP53567 150 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
CCDC78-204ENST00000439619 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
CCDC78-204ENST00000439619 FAM231DQ6ZW35 169 aa12.21□□□□□ -0.45
CCDC78-204ENST00000439619 EIF5A2Q9GZV4 153 aaKnown RBP12.21□□□□□ -0.45
CCDC78-204ENST00000439619 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.45
CCDC78-204ENST00000439619 NCR2O95944 276 aa12.2□□□□□ -0.46
CCDC78-204ENST00000439619 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
CCDC78-204ENST00000439619 GATD1Q8NB37 220 aa12.2□□□□□ -0.46
CCDC78-204ENST00000439619 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
CCDC78-204ENST00000439619 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 CT83Q5H943 113 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 LYPD6BQ8NI32 183 aa12.19□□□□□ -0.46
CCDC78-204ENST00000439619 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
CCDC78-204ENST00000439619 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
CCDC78-204ENST00000439619 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
CCDC78-204ENST00000439619 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
CCDC78-204ENST00000439619 APCSP02743 223 aa12.17□□□□□ -0.46
CCDC78-204ENST00000439619 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
CCDC78-204ENST00000439619 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
CCDC78-204ENST00000439619 H7C423 109 aa12.16□□□□□ -0.46
CCDC78-204ENST00000439619 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
CCDC78-204ENST00000439619 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
CCDC78-204ENST00000439619 CNBPP62633 177 aaKnown RBP12.15□□□□□ -0.46
CCDC78-204ENST00000439619 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
CCDC78-204ENST00000439619 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
CCDC78-204ENST00000439619 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 PMCHP20382 165 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 BTF3L4Q96K17 158 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 FAM210AQ96ND0 272 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 GFRA4Q9GZZ7 299 aa12.14□□□□□ -0.47
CCDC78-204ENST00000439619 IGKV3OR2-268A0A0C4DH90 116 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 I3L3M4 83 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
CCDC78-204ENST00000439619 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-204ENST00000439619 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
CCDC78-204ENST00000439619 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
CCDC78-204ENST00000439619 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-204ENST00000439619 ZNF25P17030 456 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-204ENST00000439619 RPL37AP61513 92 aaKnown RBP12.12□□□□□ -0.47
CCDC78-204ENST00000439619 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
CCDC78-204ENST00000439619 DNAH8Q96JB1 4490 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 GAGE12HA6NDE8 117 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 FGF6P10767 208 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 OSTCQ9NRP0 149 aa12.11□□□□□ -0.47
CCDC78-204ENST00000439619 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
CCDC78-204ENST00000439619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
CCDC78-204ENST00000439619 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
CCDC78-204ENST00000439619 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
CCDC78-204ENST00000439619 HERC1Q15751 4861 aa12.09□□□□□ -0.47
CCDC78-204ENST00000439619 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
CCDC78-204ENST00000439619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-204ENST00000439619 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
CCDC78-204ENST00000439619 RIGQ13278 110 aa12.08□□□□□ -0.48
CCDC78-204ENST00000439619 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
CCDC78-204ENST00000439619 CHCHD10Q8WYQ3 142 aaPredicted RBP12.08□□□□□ -0.48
CCDC78-204ENST00000439619 PPP1R17O96001 155 aa12.07□□□□□ -0.48
CCDC78-204ENST00000439619 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
CCDC78-204ENST00000439619 OR5A1Q8NGJ0 315 aa12.07□□□□□ -0.48
CCDC78-204ENST00000439619 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
CCDC78-204ENST00000439619 OXTP01178 125 aa12.06□□□□□ -0.48
CCDC78-204ENST00000439619 RAB4AP20338 218 aa12.05□□□□□ -0.48
CCDC78-204ENST00000439619 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
CCDC78-204ENST00000439619 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-204ENST00000439619 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
CCDC78-204ENST00000439619 TMEM242Q9NWH2 141 aa12.05□□□□□ -0.48
CCDC78-204ENST00000439619 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
CCDC78-204ENST00000439619 FCER1GP30273 86 aa12.04□□□□□ -0.48
CCDC78-204ENST00000439619 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
CCDC78-204ENST00000439619 C15orf56Q8N910 161 aa12.04□□□□□ -0.48
CCDC78-204ENST00000439619 TRBV27A0A0K0K1C4 114 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 C7orf77A4D0Y5 90 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 VCYO14598 125 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 TSHBP01222 138 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 ESDP10768 282 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
CCDC78-204ENST00000439619 SS18Q15532 418 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 PKIGQ9Y2B9 76 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 V9GYV3 84 aa12.03□□□□□ -0.48
CCDC78-204ENST00000439619 SLPIP03973 132 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 XCL1P47992 114 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms