RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 GATD1Q8NB37 220 aa13.14□□□□□ -0.31
NCKIPSD-206ENST00000439518 LYPD6BQ8NI32 183 aa13.14□□□□□ -0.31
NCKIPSD-206ENST00000439518 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
NCKIPSD-206ENST00000439518 KRTAP10-4P60372 401 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-206ENST00000439518 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
NCKIPSD-206ENST00000439518 DEFB104AQ8WTQ1 72 aa13.13□□□□□ -0.31
NCKIPSD-206ENST00000439518 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
NCKIPSD-206ENST00000439518 TRAV8-4A0A0B4J246 113 aa13.12□□□□□ -0.31
NCKIPSD-206ENST00000439518 COTL1Q14019 142 aa13.12□□□□□ -0.31
NCKIPSD-206ENST00000439518 C9orf163Q8N9P6 203 aa13.12□□□□□ -0.31
NCKIPSD-206ENST00000439518 IGLV10-54A0A075B6I4 117 aa13.11□□□□□ -0.31
NCKIPSD-206ENST00000439518 AMTP48728 403 aa13.11□□□□□ -0.31
NCKIPSD-206ENST00000439518 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
NCKIPSD-206ENST00000439518 TRAV26-2A0A0B4J265 109 aa13.1□□□□□ -0.31
NCKIPSD-206ENST00000439518 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
NCKIPSD-206ENST00000439518 CLRN3Q8NCR9 226 aa13.1□□□□□ -0.31
NCKIPSD-206ENST00000439518 FOXA3P55318 350 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-206ENST00000439518 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-206ENST00000439518 GATCO43716 136 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-206ENST00000439518 A8MWL6 223 aa13.07□□□□□ -0.32
NCKIPSD-206ENST00000439518 J3QL48 77 aa13.07□□□□□ -0.32
NCKIPSD-206ENST00000439518 UBE2L6O14933 153 aa13.07□□□□□ -0.32
NCKIPSD-206ENST00000439518 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
NCKIPSD-206ENST00000439518 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-206ENST00000439518 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-206ENST00000439518 CT83Q5H943 113 aa13.06□□□□□ -0.32
NCKIPSD-206ENST00000439518 SMIM15Q7Z3B0 74 aa13.06□□□□□ -0.32
NCKIPSD-206ENST00000439518 TEX261Q6UWH6 196 aa13.05□□□□□ -0.32
NCKIPSD-206ENST00000439518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-206ENST00000439518 hDV102S1A0JD36 115 aa13.04□□□□□ -0.32
NCKIPSD-206ENST00000439518 PANO1I0J062 215 aa13.04□□□□□ -0.32
NCKIPSD-206ENST00000439518 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-206ENST00000439518 NCR2O95944 276 aa13.04□□□□□ -0.32
NCKIPSD-206ENST00000439518 CEBPGP53567 150 aa13.04□□□□□ -0.32
NCKIPSD-206ENST00000439518 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
NCKIPSD-206ENST00000439518 SLPIP03973 132 aa13.02□□□□□ -0.33
NCKIPSD-206ENST00000439518 LINC01551Q86U37 167 aa13.02□□□□□ -0.33
NCKIPSD-206ENST00000439518 SMIM7Q9BQ49 75 aa13.02□□□□□ -0.33
NCKIPSD-206ENST00000439518 EIF5A2Q9GZV4 153 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-206ENST00000439518 TRBV6-5A0A0K0K1A5 114 aa13.01□□□□□ -0.33
NCKIPSD-206ENST00000439518 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
NCKIPSD-206ENST00000439518 H7C423 109 aa13□□□□□ -0.33
NCKIPSD-206ENST00000439518 CIRBPQ14011 172 aaKnown RBP13□□□□□ -0.33
NCKIPSD-206ENST00000439518 TSKUQ8WUA8 353 aa13□□□□□ -0.33
NCKIPSD-206ENST00000439518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 GAS8-AS1O95177 125 aa12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 APCSP02743 223 aa12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 AMMECR1LQ6DCA0 310 aa12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 AP5S1Q9NUS5 200 aa12.99□□□□□ -0.33
NCKIPSD-206ENST00000439518 A0A1B0GUT8 65 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 ZNF727A8MUV8 499 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 FGF6P10767 208 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 RPL37AP61513 92 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 C15orf56Q8N910 161 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 OSTCQ9NRP0 149 aa12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 LRP1Q07954 4544 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-206ENST00000439518 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 IGKV3OR2-268A0A0C4DH90 116 aa12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 I3L3M4 83 aa12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 PMCHP20382 165 aa12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
NCKIPSD-206ENST00000439518 RNASEKQ6P5S7 137 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-206ENST00000439518 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
NCKIPSD-206ENST00000439518 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
NCKIPSD-206ENST00000439518 OXTP01178 125 aa12.95□□□□□ -0.34
NCKIPSD-206ENST00000439518 TSHBP01222 138 aa12.95□□□□□ -0.34
NCKIPSD-206ENST00000439518 ESDP10768 282 aa12.95□□□□□ -0.34
NCKIPSD-206ENST00000439518 ZNF25P17030 456 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-206ENST00000439518 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-206ENST00000439518 RAB4AP20338 218 aa12.94□□□□□ -0.34
NCKIPSD-206ENST00000439518 POLR2KP53803 58 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-206ENST00000439518 ST20Q9HBF5 79 aa12.94□□□□□ -0.34
NCKIPSD-206ENST00000439518 V9GYV3 84 aa12.94□□□□□ -0.34
NCKIPSD-206ENST00000439518 A0A1B0GVG6 124 aa12.93□□□□□ -0.34
NCKIPSD-206ENST00000439518 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-206ENST00000439518 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-206ENST00000439518 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
NCKIPSD-206ENST00000439518 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
NCKIPSD-206ENST00000439518 CHTF8P0CG12 524 aa12.92□□□□□ -0.34
NCKIPSD-206ENST00000439518 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
NCKIPSD-206ENST00000439518 SPACA4Q8TDM5 124 aa12.92□□□□□ -0.34
NCKIPSD-206ENST00000439518 TMEM242Q9NWH2 141 aa12.92□□□□□ -0.34
NCKIPSD-206ENST00000439518 GVQW2A0A096LPI5 108 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 TRBV27A0A0K0K1C4 114 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 FOXI1Q12951 378 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 TMEM241Q24JQ0 296 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 HIGD2BQ4VC39 106 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 ISOC2Q96AB3 205 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 BTF3L4Q96K17 158 aa12.91□□□□□ -0.34
NCKIPSD-206ENST00000439518 A0A087WYN8 130 aa12.9□□□□□ -0.34
NCKIPSD-206ENST00000439518 FAM74A3Q4VXF1 159 aa12.9□□□□□ -0.34
NCKIPSD-206ENST00000439518 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-206ENST00000439518 NUP35Q8NFH5 326 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms