RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
PCNX3-202ENST00000439247 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
PCNX3-202ENST00000439247 KLLNB2CW77 178 aa10.02□□□□□ -0.81
PCNX3-202ENST00000439247 NDUFA4O00483 81 aa10.02□□□□□ -0.81
PCNX3-202ENST00000439247 IFITM1P13164 125 aa10.02□□□□□ -0.81
PCNX3-202ENST00000439247 ATP5J2P56134 94 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 Q9UF83 564 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 M0R2P5 195 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 BRI3O95415 125 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
PCNX3-202ENST00000439247 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 DAND5Q8N907 189 aa10.01□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE12JA6NER3 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 FAM223BA6NKX1 122 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 LGALS9O00182 355 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE7O76087 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE12FP0CL80 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE12GP0CL81 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE12IP0CL82 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 PROK1P58294 105 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 GAGE4Q13068 117 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 C2orf82Q6UX34 121 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 H7C423 109 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 PRM2P04554 102 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 BLCAPP62952 87 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 LITAFQ99732 161 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 H3BMM0 161 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 HTN1P15515 57 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 SMIM20Q8N5G0 67 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 UBE2WQ96B02 151 aa10□□□□□ -0.81
PCNX3-202ENST00000439247 CREBBPQ92793 2442 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 C20orf203Q8NBC4 194 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 UNC79Q9P2D8 2635 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 IGHV4-30-2A0A087WSY4 118 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 TRBV10-2A0A0K0K1G8 114 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 CCDC168Q8NDH2 2452 aa9.99□□□□□ -0.81
PCNX3-202ENST00000439247 LMO4P61968 165 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 FAM104AQ969W3 186 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
PCNX3-202ENST00000439247 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.97□□□□□ -0.81
PCNX3-202ENST00000439247 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
PCNX3-202ENST00000439247 IGHV1-69P01742 117 aa9.97□□□□□ -0.81
PCNX3-202ENST00000439247 NSUN5P1Q3KNT7 163 aa9.97□□□□□ -0.81
PCNX3-202ENST00000439247 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
PCNX3-202ENST00000439247 CHCHD5Q9BSY4 110 aa9.97□□□□□ -0.81
PCNX3-202ENST00000439247 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.81
PCNX3-202ENST00000439247 CD28P10747 220 aa9.96□□□□□ -0.81
PCNX3-202ENST00000439247 C10orf105Q8TEF2 133 aa9.96□□□□□ -0.81
PCNX3-202ENST00000439247 DCANP1Q8TF63 244 aa9.96□□□□□ -0.81
PCNX3-202ENST00000439247 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
PCNX3-202ENST00000439247 HERV-K104P63124 156 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 C9orf85Q96MD7 179 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 PDZD2O15018 2839 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 KNCNA6PVL3 124 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 M0QXV9 152 aa9.96□□□□□ -0.82
PCNX3-202ENST00000439247 MAPK1IP1LQ8NDC0 245 aa9.95□□□□□ -0.82
PCNX3-202ENST00000439247 DAZ1Q9NQZ3 744 aaKnown RBP9.95□□□□□ -0.82
PCNX3-202ENST00000439247 I3L3M4 83 aa9.95□□□□□ -0.82
PCNX3-202ENST00000439247 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
PCNX3-202ENST00000439247 NDUFA12Q9UI09 145 aa9.95□□□□□ -0.82
PCNX3-202ENST00000439247 AKAP9Q99996 3911 aa9.95□□□□□ -0.82
PCNX3-202ENST00000439247 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
PCNX3-202ENST00000439247 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
PCNX3-202ENST00000439247 RHOHQ15669 191 aa9.94□□□□□ -0.82
PCNX3-202ENST00000439247 PIMREGQ9BSJ6 248 aa9.94□□□□□ -0.82
PCNX3-202ENST00000439247 ID1P41134 155 aa9.93□□□□□ -0.82
PCNX3-202ENST00000439247 H3BUX3 64 aa9.93□□□□□ -0.82
PCNX3-202ENST00000439247 MEIG1Q5JSS6 88 aa9.93□□□□□ -0.82
PCNX3-202ENST00000439247 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
PCNX3-202ENST00000439247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.91□□□□□ -0.82
PCNX3-202ENST00000439247 A0A0J9YX75 114 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 IGKV2-29A2NJV5 120 aaPredicted RBP9.91□□□□□ -0.82
PCNX3-202ENST00000439247 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
PCNX3-202ENST00000439247 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 IGHG2P01859 326 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
PCNX3-202ENST00000439247 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 RBMY1A1P0DJD3 496 aaKnown RBP9.9□□□□□ -0.82
PCNX3-202ENST00000439247 RBMY1CP0DJD4 496 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 RBMY1FQ15415 496 aaKnown RBP9.9□□□□□ -0.82
PCNX3-202ENST00000439247 Q6Q795 121 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 MRPS36P82909 103 aaKnown RBP9.9□□□□□ -0.82
PCNX3-202ENST00000439247 Q6ZSN1 163 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 USMG5Q96IX5 58 aa9.9□□□□□ -0.82
PCNX3-202ENST00000439247 MIAQ16674 131 aa9.89□□□□□ -0.83
PCNX3-202ENST00000439247 DEFB113Q30KQ7 82 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms