RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 X6R8D5 127 aa10.72□□□□□ -0.69
LINC00163-202ENST00000439088 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 K7EQD1 137 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 PMVKQ15126 192 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 C12orf54Q6X4T0 127 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
LINC00163-202ENST00000439088 ZNF25P17030 456 aaPredicted RBP10.69□□□□□ -0.7
LINC00163-202ENST00000439088 EMP1P54849 157 aa10.69□□□□□ -0.7
LINC00163-202ENST00000439088 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
LINC00163-202ENST00000439088 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
LINC00163-202ENST00000439088 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
LINC00163-202ENST00000439088 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
LINC00163-202ENST00000439088 COTL1Q14019 142 aa10.69□□□□□ -0.7
LINC00163-202ENST00000439088 FGF6P10767 208 aa10.68□□□□□ -0.7
LINC00163-202ENST00000439088 BOD1L2Q8IYS8 172 aa10.68□□□□□ -0.7
LINC00163-202ENST00000439088 LINC00612Q8N6U2 182 aa10.68□□□□□ -0.7
LINC00163-202ENST00000439088 PHLDA1Q8WV24 401 aaPredicted RBP10.68□□□□□ -0.7
LINC00163-202ENST00000439088 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
LINC00163-202ENST00000439088 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 DLEU1O43261 78 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 TP73-AS1Q9UF72 201 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 TCTAP57738 103 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 OXLD1Q5BKU9 147 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
LINC00163-202ENST00000439088 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 NMUP48645 174 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 FHL2Q14192 279 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 DEFB135Q30KP9 77 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
LINC00163-202ENST00000439088 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
LINC00163-202ENST00000439088 NPSP0C0P6 89 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 UBE2D3P61077 147 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 UBE2D2P62837 147 aa10.66□□□□□ -0.7
LINC00163-202ENST00000439088 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
LINC00163-202ENST00000439088 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
LINC00163-202ENST00000439088 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
LINC00163-202ENST00000439088 CRYBA4P53673 196 aa10.65□□□□□ -0.7
LINC00163-202ENST00000439088 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 DEFB130AP0DP74 79 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 PCP2Q8IVA1 136 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 VCX2Q9H322 139 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 FBN1P35555 2871 aaKnown RBP10.64□□□□□ -0.71
LINC00163-202ENST00000439088 TRRAPQ9Y4A5 3859 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 SIVA1O15304 175 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 EGFEM1PQ0D2K5 195 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 GAGE1Q13065 139 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 GAGE4Q13068 117 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 GAGE5Q13069 117 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 BATFQ16520 125 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 SPANXA1Q9NS26 97 aa10.64□□□□□ -0.71
LINC00163-202ENST00000439088 LYRM9A8MSI8 78 aa10.63□□□□□ -0.71
LINC00163-202ENST00000439088 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
LINC00163-202ENST00000439088 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
LINC00163-202ENST00000439088 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
LINC00163-202ENST00000439088 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
LINC00163-202ENST00000439088 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
LINC00163-202ENST00000439088 RNF183Q96D59 192 aa10.62□□□□□ -0.71
LINC00163-202ENST00000439088 AMELXQ99217 191 aa10.62□□□□□ -0.71
LINC00163-202ENST00000439088 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
LINC00163-202ENST00000439088 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
LINC00163-202ENST00000439088 MIFP14174 115 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
LINC00163-202ENST00000439088 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 A8MZ25 164 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 COL5A1-AS1Q5SY13 56 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 CEMP1Q6PRD7 247 aaPredicted RBP10.61□□□□□ -0.71
LINC00163-202ENST00000439088 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
LINC00163-202ENST00000439088 IGHV4-28A0A0C4DH34 117 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 E9PLD3 99 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 TMEM97Q5BJF2 176 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 NTM-AS1Q6ZSK4 140 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 LOC100131303A0A0U1RQF7 123 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
LINC00163-202ENST00000439088 Q8NAQ8 132 aa10.59□□□□□ -0.71
LINC00163-202ENST00000439088 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
LINC00163-202ENST00000439088 TTTY13Q9BZ97 58 aa10.58□□□□□ -0.72
LINC00163-202ENST00000439088 TRAV8-6A0A0B4J262 113 aa10.58□□□□□ -0.72
LINC00163-202ENST00000439088 HERVK_113P61574 105 aa10.58□□□□□ -0.72
LINC00163-202ENST00000439088 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
LINC00163-202ENST00000439088 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
LINC00163-202ENST00000439088 DEFB4AO15263 64 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 TMEM170BQ5T4T1 132 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 CHAC1Q9BUX1 264 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 HIGD1BQ9P298 99 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
LINC00163-202ENST00000439088 A0A0J9YXV3 536 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
LINC00163-202ENST00000439088 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms