RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 UBE2D3P61077 147 aa8.7□□□□□ -1.02
HLA-DOB-206ENST00000438763 UBE2D2P62837 147 aa8.7□□□□□ -1.02
HLA-DOB-206ENST00000438763 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 TSHBP01222 138 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 GAGE1Q13065 139 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 GAGE4Q13068 117 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 GAGE5Q13069 117 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
HLA-DOB-206ENST00000438763 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
HLA-DOB-206ENST00000438763 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 F5H768 121 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 PAX4O43316 350 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 BTF3P20290 206 aaKnown RBP8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 COTL1Q14019 142 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 PHLDA1Q8WV24 401 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
HLA-DOB-206ENST00000438763 HYDINQ4G0P3 5121 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 IGHV3-38A0A0C4DH36 116 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 NHLRC4P0CG21 123 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 GYPEP15421 78 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 DEFB104AQ8WTQ1 72 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
HLA-DOB-206ENST00000438763 ATP5LO75964 103 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 C3orf79P0CE67 100 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 HTN3P15516 51 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 KRTDAPP60985 99 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 JOSD1Q15040 202 aaPredicted RBP8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
HLA-DOB-206ENST00000438763 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 Q6ZTC4 211 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 IFI27L1Q96BM0 104 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 LYSTQ99698 3801 aa8.64□□□□□ -1.03
HLA-DOB-206ENST00000438763 A0A0J9YY99 117 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 H3BNG1 76 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 NANOS2P60321 138 aaKnown RBP8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 ERASQ7Z444 233 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 ATP6V0E2Q8NHE4 81 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 SCGB3A1Q96QR1 104 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
HLA-DOB-206ENST00000438763 SYS1-DBNDD2H3BUS1 97 aa8.62□□□□□ -1.03
HLA-DOB-206ENST00000438763 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
HLA-DOB-206ENST00000438763 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
HLA-DOB-206ENST00000438763 NTM-AS1Q6ZSK4 140 aa8.62□□□□□ -1.03
HLA-DOB-206ENST00000438763 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
HLA-DOB-206ENST00000438763 IGIPA6NJ69 53 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 SH2D6Q7Z4S9 175 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 TMEM141Q96I45 108 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 Q8N976 141 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 ICOSQ9Y6W8 199 aa8.61□□□□□ -1.03
HLA-DOB-206ENST00000438763 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 TRBV6-8A0A0A6YYG3 113 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 PRSS1P07477 247 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 Q6ZN92 141 aa8.6□□□□□ -1.03
HLA-DOB-206ENST00000438763 A0A096LPF7 62 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 C20orf202A1L168 122 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 H7C423 109 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 NPSP0C0P6 89 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 LGALS9CQ6DKI2 356 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 TIMM21Q9BVV7 248 aa8.59□□□□□ -1.03
HLA-DOB-206ENST00000438763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
HLA-DOB-206ENST00000438763 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
HLA-DOB-206ENST00000438763 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
HLA-DOB-206ENST00000438763 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
HLA-DOB-206ENST00000438763 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
HLA-DOB-206ENST00000438763 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 H0Y8G0 127 aa8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 BAALCQ8WXS3 180 aa8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 CSDC2Q9Y534 153 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-206ENST00000438763 HERC2O95714 4834 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms