RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TSPAN13O95857 204 aa10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 PROK1P58294 105 aa10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1A1P0DJD3 496 aaKnown RBP10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1CP0DJD4 496 aa10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1FQ15415 496 aaKnown RBP10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
PTCHD3-201ENST00000438700 PRM2P04554 102 aa10.19□□□□□ -0.78
PTCHD3-201ENST00000438700 CARD19Q96LW7 228 aa10.19□□□□□ -0.78
PTCHD3-201ENST00000438700 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
PTCHD3-201ENST00000438700 ZNF256Q9Y2P7 627 aaPredicted RBP10.19□□□□□ -0.78
PTCHD3-201ENST00000438700 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 XGP55808 180 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 CRYGDP07320 174 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 CRYBA4P53673 196 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
PTCHD3-201ENST00000438700 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
PTCHD3-201ENST00000438700 VCYO14598 125 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 TSHBP01222 138 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 UBE2D1P51668 147 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 NSUN5P1Q3KNT7 163 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 M0QY20 66 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 TCL1BO95988 128 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
PTCHD3-201ENST00000438700 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 TRAV2A0A0B4J234 112 aa10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
PTCHD3-201ENST00000438700 TRBV27A0A0K0K1C4 114 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 H3BMM0 161 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 KRTAP10-3P60369 221 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 Q6ZUT4 128 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 TRGV11A0A075B6L2 103 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 CRLF1O75462 422 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 UBE2D3P61077 147 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 UBE2D2P62837 147 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 F8P00451 2351 aa10.14□□□□□ -0.79
PTCHD3-201ENST00000438700 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
PTCHD3-201ENST00000438700 NDUFA11Q86Y39 141 aa10.13□□□□□ -0.79
PTCHD3-201ENST00000438700 MAP6D1Q9H9H5 199 aa10.13□□□□□ -0.79
PTCHD3-201ENST00000438700 A0A0J9YY99 117 aa10.13□□□□□ -0.79
PTCHD3-201ENST00000438700 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 CFC1P0CG37 223 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 P0DMU3 169 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
PTCHD3-201ENST00000438700 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 JMJD1CQ15652 2540 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 A6NJY4 79 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 PMVKQ15126 192 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 RNF183Q96D59 192 aa10.11□□□□□ -0.79
PTCHD3-201ENST00000438700 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
PTCHD3-201ENST00000438700 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
PTCHD3-201ENST00000438700 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
PTCHD3-201ENST00000438700 TEN1Q86WV5 123 aa10.1□□□□□ -0.79
PTCHD3-201ENST00000438700 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
PTCHD3-201ENST00000438700 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 IGHV3-30P01768 117 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 IGHV3-30-5P0DP03 117 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 H7C2G1 150 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
PTCHD3-201ENST00000438700 A8MTW9 85 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 PPDPFLQ8WWR9 84 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 Q9UF83 564 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 LINC01587Q99440 93 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 MAST4O15021 2626 aa10.08□□□□□ -0.8
PTCHD3-201ENST00000438700 I3L3M4 83 aa10.07□□□□□ -0.8
PTCHD3-201ENST00000438700 A8MWV9 139 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 M0R2P5 195 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 PF4P02776 101 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 RHOHQ15669 191 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 AMELXQ99217 191 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 C20orf203Q8NBC4 194 aa10.06□□□□□ -0.8
PTCHD3-201ENST00000438700 IGHV3OR16-12A0A075B7B8 117 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms