RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 GVQW2A0A096LPI5 108 aaPredicted RBP9.13□□□□□ -0.95
HDAC8-213ENST00000436675 A0A1B0GV50 99 aa9.13□□□□□ -0.95
HDAC8-213ENST00000436675 DEFA1P59665 94 aa9.13□□□□□ -0.95
HDAC8-213ENST00000436675 MUC2Q02817 5179 aa9.13□□□□□ -0.95
HDAC8-213ENST00000436675 S100A9P06702 114 aaKnown RBP9.12□□□□□ -0.95
HDAC8-213ENST00000436675 COTL1Q14019 142 aa9.12□□□□□ -0.95
HDAC8-213ENST00000436675 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
HDAC8-213ENST00000436675 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
HDAC8-213ENST00000436675 PGLYRP4Q96LB8 373 aa9.11□□□□□ -0.95
HDAC8-213ENST00000436675 MED28Q9H204 178 aa9.11□□□□□ -0.95
HDAC8-213ENST00000436675 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
HDAC8-213ENST00000436675 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
HDAC8-213ENST00000436675 RNASEKQ6P5S7 137 aaKnown RBP9.1□□□□□ -0.95
HDAC8-213ENST00000436675 FER1L6-AS1Q8NA97 138 aa9.1□□□□□ -0.95
HDAC8-213ENST00000436675 FOXI1Q12951 378 aa9.09□□□□□ -0.95
HDAC8-213ENST00000436675 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
HDAC8-213ENST00000436675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
HDAC8-213ENST00000436675 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
HDAC8-213ENST00000436675 PFDN1O60925 122 aa9.08□□□□□ -0.96
HDAC8-213ENST00000436675 IGLC6P0CF74 106 aa9.08□□□□□ -0.96
HDAC8-213ENST00000436675 XCL1P47992 114 aa9.08□□□□□ -0.96
HDAC8-213ENST00000436675 TMUB2Q71RG4 321 aa9.08□□□□□ -0.96
HDAC8-213ENST00000436675 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
HDAC8-213ENST00000436675 CACNG7P62955 275 aa9.07□□□□□ -0.96
HDAC8-213ENST00000436675 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
HDAC8-213ENST00000436675 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
HDAC8-213ENST00000436675 SFT2D1Q8WV19 159 aa9.07□□□□□ -0.96
HDAC8-213ENST00000436675 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
HDAC8-213ENST00000436675 Q6ZNX1 250 aa9.06□□□□□ -0.96
HDAC8-213ENST00000436675 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
HDAC8-213ENST00000436675 PKIGQ9Y2B9 76 aa9.06□□□□□ -0.96
HDAC8-213ENST00000436675 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 CCL25O15444 150 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 MT-ND6P03923 174 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
HDAC8-213ENST00000436675 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 NTF3P20783 257 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 SYCNQ0VAF6 134 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 LYZL1Q6UWQ5 148 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 FAM213BQ8TBF2 198 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
HDAC8-213ENST00000436675 IGHV1-58A0A0C4DH39 117 aa9.04□□□□□ -0.96
HDAC8-213ENST00000436675 FGF6P10767 208 aa9.04□□□□□ -0.96
HDAC8-213ENST00000436675 RPS20P60866 119 aaKnown RBP9.04□□□□□ -0.96
HDAC8-213ENST00000436675 ZNF664Q8N3J9 261 aa9.04□□□□□ -0.96
HDAC8-213ENST00000436675 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
HDAC8-213ENST00000436675 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
HDAC8-213ENST00000436675 KCNRGQ8N5I3 272 aa9.03□□□□□ -0.96
HDAC8-213ENST00000436675 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
HDAC8-213ENST00000436675 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 ARPC5O15511 151 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 APCSP02743 223 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 BCL2P10415 239 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 PRR4Q16378 134 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 OR5A1Q8NGJ0 315 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
HDAC8-213ENST00000436675 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
HDAC8-213ENST00000436675 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
HDAC8-213ENST00000436675 F2Z2F3 143 aa9.01□□□□□ -0.97
HDAC8-213ENST00000436675 IFNA1P01562 189 aa9.01□□□□□ -0.97
HDAC8-213ENST00000436675 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
HDAC8-213ENST00000436675 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
HDAC8-213ENST00000436675 RAB19A4D1S5 217 aa9□□□□□ -0.97
HDAC8-213ENST00000436675 C19orf71A6NCJ1 209 aa9□□□□□ -0.97
HDAC8-213ENST00000436675 CAMPP49913 170 aa9□□□□□ -0.97
HDAC8-213ENST00000436675 TWIST1Q15672 202 aa9□□□□□ -0.97
HDAC8-213ENST00000436675 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
HDAC8-213ENST00000436675 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
HDAC8-213ENST00000436675 XKRY2A2RUG3 117 aa8.99□□□□□ -0.97
HDAC8-213ENST00000436675 NCR2O95944 276 aa8.99□□□□□ -0.97
HDAC8-213ENST00000436675 TMEM101Q96IK0 257 aa8.99□□□□□ -0.97
HDAC8-213ENST00000436675 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
HDAC8-213ENST00000436675 A0A0U1RQV1 116 aa8.98□□□□□ -0.97
HDAC8-213ENST00000436675 G3V3Q6 166 aa8.98□□□□□ -0.97
HDAC8-213ENST00000436675 H7C423 109 aa8.98□□□□□ -0.97
HDAC8-213ENST00000436675 SS18Q15532 418 aa8.98□□□□□ -0.97
HDAC8-213ENST00000436675 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
HDAC8-213ENST00000436675 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
HDAC8-213ENST00000436675 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
HDAC8-213ENST00000436675 DIRC1Q969H9 104 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 ISOC2Q96AB3 205 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 GNG13Q9P2W3 67 aa8.97□□□□□ -0.97
HDAC8-213ENST00000436675 IGLV7-43P04211 117 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 PMCHP20382 165 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 GNG4P50150 75 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 CCL20P78556 96 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 C9orf62Q8N4C0 152 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 C11orf52Q96A22 123 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
HDAC8-213ENST00000436675 SMLR1H3BR10 107 aa8.95□□□□□ -0.98
HDAC8-213ENST00000436675 MALP21145 153 aa8.95□□□□□ -0.98
HDAC8-213ENST00000436675 CTRLP40313 264 aa8.95□□□□□ -0.98
HDAC8-213ENST00000436675 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms