RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
NUP50-210ENST00000434760 TMEM243Q9BU79 118 aa10.2□□□□□ -0.78
NUP50-210ENST00000434760 NIT2Q9NQR4 276 aa10.2□□□□□ -0.78
NUP50-210ENST00000434760 REG3AQ06141 175 aa10.19□□□□□ -0.78
NUP50-210ENST00000434760 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
NUP50-210ENST00000434760 A0A1B0GUV1 79 aa10.18□□□□□ -0.78
NUP50-210ENST00000434760 PLA2G1BP04054 148 aaKnown RBP10.18□□□□□ -0.78
NUP50-210ENST00000434760 GATD1Q8NB37 220 aa10.18□□□□□ -0.78
NUP50-210ENST00000434760 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
NUP50-210ENST00000434760 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
NUP50-210ENST00000434760 TWIST1Q15672 202 aa10.17□□□□□ -0.78
NUP50-210ENST00000434760 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
NUP50-210ENST00000434760 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
NUP50-210ENST00000434760 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
NUP50-210ENST00000434760 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
NUP50-210ENST00000434760 AMTP48728 403 aa10.15□□□□□ -0.78
NUP50-210ENST00000434760 COTL1Q14019 142 aa10.15□□□□□ -0.78
NUP50-210ENST00000434760 CT83Q5H943 113 aa10.15□□□□□ -0.78
NUP50-210ENST00000434760 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.78
NUP50-210ENST00000434760 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
NUP50-210ENST00000434760 DGAT2L7PQ6IED9 249 aa10.14□□□□□ -0.79
NUP50-210ENST00000434760 PANO1I0J062 215 aa10.13□□□□□ -0.79
NUP50-210ENST00000434760 NDUFS6O75380 124 aaKnown RBP10.13□□□□□ -0.79
NUP50-210ENST00000434760 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
NUP50-210ENST00000434760 LINC01551Q86U37 167 aa10.13□□□□□ -0.79
NUP50-210ENST00000434760 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.13□□□□□ -0.79
NUP50-210ENST00000434760 GATCO43716 136 aaKnown RBP10.12□□□□□ -0.79
NUP50-210ENST00000434760 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
NUP50-210ENST00000434760 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
NUP50-210ENST00000434760 A8MWL6 223 aa10.11□□□□□ -0.79
NUP50-210ENST00000434760 UBE2L6O14933 153 aa10.11□□□□□ -0.79
NUP50-210ENST00000434760 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
NUP50-210ENST00000434760 CEBPGP53567 150 aa10.11□□□□□ -0.79
NUP50-210ENST00000434760 CLRN3Q8NCR9 226 aa10.11□□□□□ -0.79
NUP50-210ENST00000434760 A0A1B0GVG6 124 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
NUP50-210ENST00000434760 NCR2O95944 276 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 SLPIP03973 132 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 CIRBPQ14011 172 aaKnown RBP10.1□□□□□ -0.79
NUP50-210ENST00000434760 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 C15orf56Q8N910 161 aa10.1□□□□□ -0.79
NUP50-210ENST00000434760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
NUP50-210ENST00000434760 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
NUP50-210ENST00000434760 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
NUP50-210ENST00000434760 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
NUP50-210ENST00000434760 SRP19P09132 144 aaKnown RBP10.09□□□□□ -0.79
NUP50-210ENST00000434760 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 APCSP02743 223 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 TEX261Q6UWH6 196 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
NUP50-210ENST00000434760 EIF5A2Q9GZV4 153 aaKnown RBP10.08□□□□□ -0.8
NUP50-210ENST00000434760 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
NUP50-210ENST00000434760 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
NUP50-210ENST00000434760 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
NUP50-210ENST00000434760 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
NUP50-210ENST00000434760 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 ZNF727A8MUV8 499 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 H7C423 109 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 TSHBP01222 138 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 FGF6P10767 208 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
NUP50-210ENST00000434760 TMEM191AQ9H0A3 160 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 V9GYV3 84 aa10.06□□□□□ -0.8
NUP50-210ENST00000434760 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
NUP50-210ENST00000434760 J3QL48 77 aa10.05□□□□□ -0.8
NUP50-210ENST00000434760 ESDP10768 282 aa10.05□□□□□ -0.8
NUP50-210ENST00000434760 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 I3L3M4 83 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
NUP50-210ENST00000434760 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
NUP50-210ENST00000434760 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 CHCHD10Q8WYQ3 142 aaPredicted RBP10.04□□□□□ -0.8
NUP50-210ENST00000434760 ISOC2Q96AB3 205 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
NUP50-210ENST00000434760 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 C9JQL5 133 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 RAB4AP20338 218 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 POLR2KP53803 58 aaKnown RBP10.03□□□□□ -0.8
NUP50-210ENST00000434760 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
NUP50-210ENST00000434760 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 BORCS7Q96B45 105 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 MRAP2Q96G30 205 aa10.03□□□□□ -0.8
NUP50-210ENST00000434760 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
NUP50-210ENST00000434760 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
NUP50-210ENST00000434760 FOXI1Q12951 378 aa10.02□□□□□ -0.81
NUP50-210ENST00000434760 NUP35Q8NFH5 326 aa10.02□□□□□ -0.81
NUP50-210ENST00000434760 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
NUP50-210ENST00000434760 AP5S1Q9NUS5 200 aa10.02□□□□□ -0.81
NUP50-210ENST00000434760 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
NUP50-210ENST00000434760 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
NUP50-210ENST00000434760 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
NUP50-210ENST00000434760 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
NUP50-210ENST00000434760 NRACQ8N912 160 aa10.01□□□□□ -0.81
NUP50-210ENST00000434760 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
NUP50-210ENST00000434760 PMCHP20382 165 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms