RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 GIG44P09565 113 aaPredicted RBP17.15■□□□□ 0.34
MBD3-202ENST00000434436 SMIM13P0DJ93 91 aa17.15■□□□□ 0.34
MBD3-202ENST00000434436 RNASE8Q8TDE3 154 aaKnown RBP17.15■□□□□ 0.34
MBD3-202ENST00000434436 CMC4P56277 68 aaPredicted RBP17.15■□□□□ 0.34
MBD3-202ENST00000434436 NFE4Q86UQ8 179 aa17.15■□□□□ 0.34
MBD3-202ENST00000434436 FAM104AQ969W3 186 aa17.15■□□□□ 0.34
MBD3-202ENST00000434436 ZNF815PA8K554 130 aa17.14■□□□□ 0.33
MBD3-202ENST00000434436 HERVK_113P61574 105 aa17.14■□□□□ 0.33
MBD3-202ENST00000434436 TMEM170BQ5T4T1 132 aa17.14■□□□□ 0.33
MBD3-202ENST00000434436 HIST1H4GQ99525 98 aa17.13■□□□□ 0.33
MBD3-202ENST00000434436 K7ERJ3 54 aa17.13■□□□□ 0.33
MBD3-202ENST00000434436 PLEKHB2Q96CS7 222 aa17.13■□□□□ 0.33
MBD3-202ENST00000434436 PHLDA1Q8WV24 401 aaPredicted RBP17.12■□□□□ 0.33
MBD3-202ENST00000434436 PYGO1Q9Y3Y4 419 aa17.12■□□□□ 0.33
MBD3-202ENST00000434436 CHCHD7Q9BUK0 85 aa17.12■□□□□ 0.33
MBD3-202ENST00000434436 NHP2Q9NX24 153 aaKnown RBP17.12■□□□□ 0.33
MBD3-202ENST00000434436 DNAJC30Q96LL9 226 aa17.11■□□□□ 0.33
MBD3-202ENST00000434436 FAM110AQ9BQ89 295 aa17.11■□□□□ 0.33
MBD3-202ENST00000434436 TRGV1A0A0A0MS02 117 aa17.11■□□□□ 0.33
MBD3-202ENST00000434436 TSPEAR-AS2P59090 65 aa17.11■□□□□ 0.33
MBD3-202ENST00000434436 VCX2Q9H322 139 aa17.11■□□□□ 0.33
MBD3-202ENST00000434436 CEMP1Q6PRD7 247 aaPredicted RBP17.1■□□□□ 0.33
MBD3-202ENST00000434436 TMEM263Q8WUH6 116 aaKnown RBP17.1■□□□□ 0.33
MBD3-202ENST00000434436 NOTCH3Q9UM47 2321 aa17.09■□□□□ 0.33
MBD3-202ENST00000434436 IGHV3-38A0A0C4DH36 116 aa17.09■□□□□ 0.33
MBD3-202ENST00000434436 RPL35AP18077 110 aaKnown RBP17.09■□□□□ 0.33
MBD3-202ENST00000434436 A0A0J9YXV3 536 aa17.08■□□□□ 0.33
MBD3-202ENST00000434436 Q6ZTI0 123 aa17.08■□□□□ 0.33
MBD3-202ENST00000434436 ZNF479Q96JC4 524 aa17.08■□□□□ 0.33
MBD3-202ENST00000434436 AMELXQ99217 191 aa17.08■□□□□ 0.33
MBD3-202ENST00000434436 GAGE10A6NGK3 116 aa17.08■□□□□ 0.32
MBD3-202ENST00000434436 A0A1W2PPM0 123 aa17.07■□□□□ 0.32
MBD3-202ENST00000434436 ZNF22P17026 224 aaPredicted RBP17.07■□□□□ 0.32
MBD3-202ENST00000434436 SCGB1D4Q6XE38 83 aa17.07■□□□□ 0.32
MBD3-202ENST00000434436 NDUFA11Q86Y39 141 aa17.07■□□□□ 0.32
MBD3-202ENST00000434436 TMEM223A0PJW6 202 aa17.06■□□□□ 0.32
MBD3-202ENST00000434436 NOTCH2Q04721 2471 aa17.06■□□□□ 0.32
MBD3-202ENST00000434436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.05■□□□□ 0.32
MBD3-202ENST00000434436 IGKV2-29A2NJV5 120 aaPredicted RBP17.05■□□□□ 0.32
MBD3-202ENST00000434436 C12orf74Q32Q52 190 aa17.05■□□□□ 0.32
MBD3-202ENST00000434436 UBE2D4Q9Y2X8 147 aa17.05■□□□□ 0.32
MBD3-202ENST00000434436 SAMD5Q5TGI4 173 aa17.05■□□□□ 0.32
MBD3-202ENST00000434436 K7EP34 96 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 RNASE13Q5GAN3 156 aaKnown RBP17.04■□□□□ 0.32
MBD3-202ENST00000434436 PLAC8L1A1L4L8 177 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 J3QQQ9 107 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 CRYBA4P53673 196 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 COTL1Q14019 142 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 CSNK1G2-AS1Q8NCQ2 148 aa17.04■□□□□ 0.32
MBD3-202ENST00000434436 NOP10Q9NPE3 64 aaKnown RBP17.04■□□□□ 0.32
MBD3-202ENST00000434436 A0A0J9YY99 117 aa17.03■□□□□ 0.32
MBD3-202ENST00000434436 OTOGQ6ZRI0 2925 aa17.03■□□□□ 0.32
MBD3-202ENST00000434436 GTF2H5Q6ZYL4 71 aa17.02■□□□□ 0.32
MBD3-202ENST00000434436 SPANXA1Q9NS26 97 aa17.02■□□□□ 0.32
MBD3-202ENST00000434436 TRAV4A0A0B4J268 109 aa17.01■□□□□ 0.31
MBD3-202ENST00000434436 INAFM1C9JVW0 142 aa17.01■□□□□ 0.31
MBD3-202ENST00000434436 DAZ2Q13117 558 aaKnown RBP17.01■□□□□ 0.31
MBD3-202ENST00000434436 LINC00482Q8N8I6 264 aa17.01■□□□□ 0.31
MBD3-202ENST00000434436 LEPROTO15243 131 aa17.01■□□□□ 0.31
MBD3-202ENST00000434436 MRPS36P82909 103 aaKnown RBP17.01■□□□□ 0.31
MBD3-202ENST00000434436 A0A1B0GWB2 263 aa17■□□□□ 0.31
MBD3-202ENST00000434436 PF4P02776 101 aa17■□□□□ 0.31
MBD3-202ENST00000434436 OR5A1Q8NGJ0 315 aa17■□□□□ 0.31
MBD3-202ENST00000434436 C16orf74Q96GX8 76 aa17■□□□□ 0.31
MBD3-202ENST00000434436 SPCS1Q9Y6A9 102 aa17■□□□□ 0.31
MBD3-202ENST00000434436 IGLL5B9A064 214 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 FABP2P12104 132 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 LGALS3P17931 250 aaKnown RBP16.99■□□□□ 0.31
MBD3-202ENST00000434436 C1QTNF4Q9BXJ3 329 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 IGHV3-64A0A075B6Q5 118 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 GAGE12BA1L429 117 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 K7EQD1 137 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 SRSF9Q13242 221 aaKnown RBP eCLIP16.99■□□□□ 0.31
MBD3-202ENST00000434436 Q6ZUT4 128 aa16.99■□□□□ 0.31
MBD3-202ENST00000434436 C2CD3Q4AC94 2353 aa16.97■□□□□ 0.31
MBD3-202ENST00000434436 SLC25A29Q8N8R3 303 aa16.97■□□□□ 0.31
MBD3-202ENST00000434436 TRBV10-1A0A0K0K1A3 114 aa16.96■□□□□ 0.31
MBD3-202ENST00000434436 FN1P02751 2386 aaKnown RBP16.96■□□□□ 0.31
MBD3-202ENST00000434436 SPANXB1Q9NS25 103 aaPredicted RBP16.96■□□□□ 0.3
MBD3-202ENST00000434436 RPL36AP83881 106 aaKnown RBP16.95■□□□□ 0.3
MBD3-202ENST00000434436 RPL36ALQ969Q0 106 aaKnown RBP16.95■□□□□ 0.3
MBD3-202ENST00000434436 GAGE7O76087 117 aa16.95■□□□□ 0.3
MBD3-202ENST00000434436 GAGE12FP0CL80 117 aa16.95■□□□□ 0.3
MBD3-202ENST00000434436 GAGE12GP0CL81 117 aa16.95■□□□□ 0.3
MBD3-202ENST00000434436 GAGE12IP0CL82 117 aa16.95■□□□□ 0.3
MBD3-202ENST00000434436 RRN3P1Q2M238 152 aa16.95■□□□□ 0.3
MBD3-202ENST00000434436 OVOL2Q9BRP0 275 aa16.94■□□□□ 0.3
MBD3-202ENST00000434436 NSD1Q96L73 2696 aaPredicted RBP16.94■□□□□ 0.3
MBD3-202ENST00000434436 TINCRA0A1B0GVN0 87 aa16.93■□□□□ 0.3
MBD3-202ENST00000434436 NTM-AS1Q6ZSK4 140 aa16.93■□□□□ 0.3
MBD3-202ENST00000434436 SPATA3Q8NHX4 192 aa16.93■□□□□ 0.3
MBD3-202ENST00000434436 UBE2D3P61077 147 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 UBE2D2P62837 147 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 GAGE12JA6NER3 117 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 IGHV3-30P01768 117 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 IGHV3-30-5P0DP03 117 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 UBE2D1P51668 147 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 GAGE4Q13068 117 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 GAGE5Q13069 117 aa16.92■□□□□ 0.3
MBD3-202ENST00000434436 GAGE13Q4V321 117 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms