RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CITED2Q99967 270 aaPredicted RBP11.51□□□□□ -0.57
SCARF1-203ENST00000434376 PLA2G2AP14555 144 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 Q6ZSV7 163 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 ESM1Q9NQ30 184 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 DNAJC9-AS1A6NH13 148 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 LINC01619G3V211 115 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 C9JAW5 83 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 TCL1BO95988 128 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 CFAP126Q5VTH2 177 aa11.5□□□□□ -0.57
SCARF1-203ENST00000434376 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 A8MWV9 139 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 FHL3Q13643 280 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 Q6ZUT4 128 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 HERVK_113P61574 105 aa11.49□□□□□ -0.57
SCARF1-203ENST00000434376 ELANEP08246 267 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 NPC2P61916 151 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 PDZD2O15018 2839 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 KLLNB2CW77 178 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 TRPT1Q86TN4 253 aaKnown RBP11.48□□□□□ -0.57
SCARF1-203ENST00000434376 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
SCARF1-203ENST00000434376 PRSS2P07478 247 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 J3QLI3 93 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 ANKRD29Q8N6D5 301 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 K7EMT4 169 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 TOMM6Q96B49 74 aa11.47□□□□□ -0.57
SCARF1-203ENST00000434376 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
SCARF1-203ENST00000434376 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
SCARF1-203ENST00000434376 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
SCARF1-203ENST00000434376 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
SCARF1-203ENST00000434376 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.57
SCARF1-203ENST00000434376 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
SCARF1-203ENST00000434376 B5MCH6 92 aa11.45□□□□□ -0.58
SCARF1-203ENST00000434376 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
SCARF1-203ENST00000434376 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
SCARF1-203ENST00000434376 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
SCARF1-203ENST00000434376 LYRM7Q5U5X0 104 aa11.45□□□□□ -0.58
SCARF1-203ENST00000434376 CARD19Q96LW7 228 aa11.45□□□□□ -0.58
SCARF1-203ENST00000434376 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
SCARF1-203ENST00000434376 NSD1Q96L73 2696 aaPredicted RBP11.45□□□□□ -0.58
SCARF1-203ENST00000434376 TEX29Q8N6K0 151 aa11.44□□□□□ -0.58
SCARF1-203ENST00000434376 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
SCARF1-203ENST00000434376 TEN1Q86WV5 123 aa11.44□□□□□ -0.58
SCARF1-203ENST00000434376 STHQ8IWL8 128 aa11.44□□□□□ -0.58
SCARF1-203ENST00000434376 SPXQ9BT56 116 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 A8MZ25 164 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 Q6ZSN1 163 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 CCL24O00175 119 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 TSPEAR-AS2P59090 65 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 LINC00315P59091 139 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
SCARF1-203ENST00000434376 LINC01546A6NGU7 62 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 H3BMM0 161 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 CRYGDP07320 174 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 VCYO14598 125 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 CFC1P0CG37 223 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 TNFRSF18Q9Y5U5 241 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 A0A0J9YY99 117 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 A4D1N5 150 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
SCARF1-203ENST00000434376 SLC25A20O43772 301 aa11.41□□□□□ -0.58
SCARF1-203ENST00000434376 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
SCARF1-203ENST00000434376 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
SCARF1-203ENST00000434376 KLK9Q2XQG4 91 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
SCARF1-203ENST00000434376 TRRAPQ9Y4A5 3859 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 FBN1P35555 2871 aaKnown RBP11.4□□□□□ -0.58
SCARF1-203ENST00000434376 COL6A5A8TX70 2615 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 SNCGO76070 127 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 FAM19A4Q96LR4 140 aa11.4□□□□□ -0.58
SCARF1-203ENST00000434376 TSHBP01222 138 aa11.4□□□□□ -0.59
SCARF1-203ENST00000434376 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.59
SCARF1-203ENST00000434376 IGHV4-4A0A075B6R2 117 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 J3QQQ9 107 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 UBE2D1P51668 147 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 PMVKQ15126 192 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 M0QY20 66 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 C10orf126Q8N4M7 172 aa11.39□□□□□ -0.59
SCARF1-203ENST00000434376 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 C3orf56Q8N813 242 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 J3QKU1 62 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 TTC32Q5I0X7 151 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 VCX2Q9H322 139 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
SCARF1-203ENST00000434376 ZNRF2Q8NHG8 242 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms