RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 A0A1B0GUV1 79 aa12.95□□□□□ -0.34
HLA-B-250ENST00000434333 K7EN84 100 aa12.95□□□□□ -0.34
HLA-B-250ENST00000434333 RNASE7Q9H1E1 156 aaKnown RBP12.94□□□□□ -0.34
HLA-B-250ENST00000434333 PANO1I0J062 215 aa12.93□□□□□ -0.34
HLA-B-250ENST00000434333 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
HLA-B-250ENST00000434333 OCC1Q8TAD7 63 aa12.93□□□□□ -0.34
HLA-B-250ENST00000434333 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
HLA-B-250ENST00000434333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
HLA-B-250ENST00000434333 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
HLA-B-250ENST00000434333 TWIST1Q15672 202 aa12.91□□□□□ -0.34
HLA-B-250ENST00000434333 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
HLA-B-250ENST00000434333 GATD1Q8NB37 220 aa12.91□□□□□ -0.34
HLA-B-250ENST00000434333 CLRN3Q8NCR9 226 aa12.91□□□□□ -0.34
HLA-B-250ENST00000434333 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
HLA-B-250ENST00000434333 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
HLA-B-250ENST00000434333 CNBPP62633 177 aaKnown RBP12.9□□□□□ -0.34
HLA-B-250ENST00000434333 COTL1Q14019 142 aa12.9□□□□□ -0.34
HLA-B-250ENST00000434333 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
HLA-B-250ENST00000434333 AMTP48728 403 aa12.89□□□□□ -0.35
HLA-B-250ENST00000434333 SLPIP03973 132 aa12.88□□□□□ -0.35
HLA-B-250ENST00000434333 hCG_2014768A0A024R1R8 64 aa12.87□□□□□ -0.35
HLA-B-250ENST00000434333 UBE2L6O14933 153 aa12.87□□□□□ -0.35
HLA-B-250ENST00000434333 HNRNPA3P51991 378 aaKnown RBP12.87□□□□□ -0.35
HLA-B-250ENST00000434333 FOXA3P55318 350 aaPredicted RBP12.87□□□□□ -0.35
HLA-B-250ENST00000434333 RPL37AP61513 92 aaKnown RBP12.87□□□□□ -0.35
HLA-B-250ENST00000434333 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
HLA-B-250ENST00000434333 hDV102S1A0JD36 115 aa12.86□□□□□ -0.35
HLA-B-250ENST00000434333 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
HLA-B-250ENST00000434333 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
HLA-B-250ENST00000434333 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
HLA-B-250ENST00000434333 OXTP01178 125 aa12.85□□□□□ -0.35
HLA-B-250ENST00000434333 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
HLA-B-250ENST00000434333 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
HLA-B-250ENST00000434333 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
HLA-B-250ENST00000434333 GATCO43716 136 aaKnown RBP12.83□□□□□ -0.36
HLA-B-250ENST00000434333 AKAP14Q86UN6 197 aa12.83□□□□□ -0.36
HLA-B-250ENST00000434333 NCR2O95944 276 aa12.82□□□□□ -0.36
HLA-B-250ENST00000434333 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
HLA-B-250ENST00000434333 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
HLA-B-250ENST00000434333 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
HLA-B-250ENST00000434333 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
HLA-B-250ENST00000434333 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
HLA-B-250ENST00000434333 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 A8MWL6 223 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 CT83Q5H943 113 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
HLA-B-250ENST00000434333 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
HLA-B-250ENST00000434333 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
HLA-B-250ENST00000434333 APCSP02743 223 aa12.79□□□□□ -0.36
HLA-B-250ENST00000434333 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
HLA-B-250ENST00000434333 TEX261Q6UWH6 196 aa12.79□□□□□ -0.36
HLA-B-250ENST00000434333 TRBV6-5A0A0K0K1A5 114 aa12.78□□□□□ -0.36
HLA-B-250ENST00000434333 FAM231BA6NCW3 169 aa12.78□□□□□ -0.36
HLA-B-250ENST00000434333 H7C423 109 aa12.78□□□□□ -0.36
HLA-B-250ENST00000434333 SPACA4Q8TDM5 124 aa12.78□□□□□ -0.36
HLA-B-250ENST00000434333 A0A087WYN8 130 aa12.77□□□□□ -0.37
HLA-B-250ENST00000434333 A0A1B0GVG6 124 aa12.77□□□□□ -0.37
HLA-B-250ENST00000434333 FGF6P10767 208 aa12.77□□□□□ -0.37
HLA-B-250ENST00000434333 CEBPGP53567 150 aa12.77□□□□□ -0.37
HLA-B-250ENST00000434333 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
HLA-B-250ENST00000434333 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
HLA-B-250ENST00000434333 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
HLA-B-250ENST00000434333 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
HLA-B-250ENST00000434333 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
HLA-B-250ENST00000434333 I3L3M4 83 aa12.75□□□□□ -0.37
HLA-B-250ENST00000434333 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
HLA-B-250ENST00000434333 ESDP10768 282 aa12.75□□□□□ -0.37
HLA-B-250ENST00000434333 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
HLA-B-250ENST00000434333 CFAP161Q6P656 301 aa12.75□□□□□ -0.37
HLA-B-250ENST00000434333 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
HLA-B-250ENST00000434333 HIGD1CA8MV81 97 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 TSHBP01222 138 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 ZNF25P17030 456 aaPredicted RBP12.74□□□□□ -0.37
HLA-B-250ENST00000434333 PMCHP20382 165 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 FOXI1Q12951 378 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 SERTAD4-AS1Q5TG53 156 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
HLA-B-250ENST00000434333 GVQW2A0A096LPI5 108 aaPredicted RBP12.73□□□□□ -0.37
HLA-B-250ENST00000434333 RPS10P46783 165 aaKnown RBP12.73□□□□□ -0.37
HLA-B-250ENST00000434333 OR5A1Q8NGJ0 315 aa12.73□□□□□ -0.37
HLA-B-250ENST00000434333 FAM210AQ96ND0 272 aa12.73□□□□□ -0.37
HLA-B-250ENST00000434333 TMEM191AQ9H0A3 160 aa12.73□□□□□ -0.37
HLA-B-250ENST00000434333 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
HLA-B-250ENST00000434333 A0A1B0GUT8 65 aa12.72□□□□□ -0.37
HLA-B-250ENST00000434333 SRP19P09132 144 aaKnown RBP12.72□□□□□ -0.37
HLA-B-250ENST00000434333 POLR2KP53803 58 aaKnown RBP12.72□□□□□ -0.37
HLA-B-250ENST00000434333 COX6A2Q02221 97 aa12.72□□□□□ -0.37
HLA-B-250ENST00000434333 EIF5A2Q9GZV4 153 aaKnown RBP12.72□□□□□ -0.37
HLA-B-250ENST00000434333 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
HLA-B-250ENST00000434333 TMEM242Q9NWH2 141 aa12.72□□□□□ -0.37
HLA-B-250ENST00000434333 RAB4AP20338 218 aa12.71□□□□□ -0.37
HLA-B-250ENST00000434333 PRSS3P2Q8NHM4 247 aa12.71□□□□□ -0.37
HLA-B-250ENST00000434333 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
HLA-B-250ENST00000434333 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
HLA-B-250ENST00000434333 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
HLA-B-250ENST00000434333 ZNF727A8MUV8 499 aa12.7□□□□□ -0.38
HLA-B-250ENST00000434333 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
HLA-B-250ENST00000434333 TRBV27A0A0K0K1C4 114 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms