RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 HLA-DQA1P01909 254 aa13.19□□□□□ -0.3
LMBR1-208ENST00000434278 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
LMBR1-208ENST00000434278 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
LMBR1-208ENST00000434278 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
LMBR1-208ENST00000434278 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
LMBR1-208ENST00000434278 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
LMBR1-208ENST00000434278 A0A1B0GUV1 79 aa13.17□□□□□ -0.3
LMBR1-208ENST00000434278 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
LMBR1-208ENST00000434278 REG3AQ06141 175 aa13.17□□□□□ -0.3
LMBR1-208ENST00000434278 COTL1Q14019 142 aa13.17□□□□□ -0.3
LMBR1-208ENST00000434278 GFRA4Q9GZZ7 299 aa13.17□□□□□ -0.3
LMBR1-208ENST00000434278 FAM229AH3BQW9 127 aa13.16□□□□□ -0.3
LMBR1-208ENST00000434278 AMTP48728 403 aa13.16□□□□□ -0.3
LMBR1-208ENST00000434278 C14orf177Q52M58 125 aa13.16□□□□□ -0.3
LMBR1-208ENST00000434278 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
LMBR1-208ENST00000434278 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
LMBR1-208ENST00000434278 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
LMBR1-208ENST00000434278 HIGD1CA8MV81 97 aa13.14□□□□□ -0.31
LMBR1-208ENST00000434278 UBE2L6O14933 153 aa13.14□□□□□ -0.31
LMBR1-208ENST00000434278 C9JQL5 133 aa13.13□□□□□ -0.31
LMBR1-208ENST00000434278 GAS8-AS1O95177 125 aa13.13□□□□□ -0.31
LMBR1-208ENST00000434278 PRSS1P07477 247 aa13.13□□□□□ -0.31
LMBR1-208ENST00000434278 TEX261Q6UWH6 196 aa13.13□□□□□ -0.31
LMBR1-208ENST00000434278 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
LMBR1-208ENST00000434278 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
LMBR1-208ENST00000434278 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
LMBR1-208ENST00000434278 V9GYV3 84 aa13.12□□□□□ -0.31
LMBR1-208ENST00000434278 FAM231BA6NCW3 169 aa13.11□□□□□ -0.31
LMBR1-208ENST00000434278 SDHAF1A6NFY7 115 aa13.11□□□□□ -0.31
LMBR1-208ENST00000434278 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
LMBR1-208ENST00000434278 TMEM241Q24JQ0 296 aa13.11□□□□□ -0.31
LMBR1-208ENST00000434278 ISOC2Q96AB3 205 aa13.11□□□□□ -0.31
LMBR1-208ENST00000434278 TRAV8-4A0A0B4J246 113 aa13.1□□□□□ -0.31
LMBR1-208ENST00000434278 NCR2O95944 276 aa13.1□□□□□ -0.31
LMBR1-208ENST00000434278 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
LMBR1-208ENST00000434278 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
LMBR1-208ENST00000434278 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
LMBR1-208ENST00000434278 TMEM191AQ9H0A3 160 aa13.1□□□□□ -0.31
LMBR1-208ENST00000434278 TRBV6-5A0A0K0K1A5 114 aa13.09□□□□□ -0.31
LMBR1-208ENST00000434278 SRRM2Q9UQ35 2752 aaKnown RBP13.09□□□□□ -0.31
LMBR1-208ENST00000434278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
LMBR1-208ENST00000434278 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
LMBR1-208ENST00000434278 APCSP02743 223 aa13.08□□□□□ -0.32
LMBR1-208ENST00000434278 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
LMBR1-208ENST00000434278 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
LMBR1-208ENST00000434278 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
LMBR1-208ENST00000434278 MYCBP2O75592 4640 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 I3L3M4 83 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 RAB4AP20338 218 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 ADIRFQ15847 76 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 NAT8Q9UHE5 227 aa13.07□□□□□ -0.32
LMBR1-208ENST00000434278 PMCHP20382 165 aa13.06□□□□□ -0.32
LMBR1-208ENST00000434278 RPS10P46783 165 aaKnown RBP13.06□□□□□ -0.32
LMBR1-208ENST00000434278 PEA15Q15121 130 aa13.06□□□□□ -0.32
LMBR1-208ENST00000434278 CIRBP-AS1Q8TBR5 109 aa13.06□□□□□ -0.32
LMBR1-208ENST00000434278 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 H7C423 109 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 FGF6P10767 208 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 AMMECR1LQ6DCA0 310 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 HERC1Q15751 4861 aa13.05□□□□□ -0.32
LMBR1-208ENST00000434278 TSHBP01222 138 aa13.04□□□□□ -0.32
LMBR1-208ENST00000434278 RIGQ13278 110 aa13.04□□□□□ -0.32
LMBR1-208ENST00000434278 RNASEKQ6P5S7 137 aaKnown RBP13.04□□□□□ -0.32
LMBR1-208ENST00000434278 MRAP2Q96G30 205 aa13.04□□□□□ -0.32
LMBR1-208ENST00000434278 NAT8BQ9UHF3 227 aa13.04□□□□□ -0.32
LMBR1-208ENST00000434278 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
LMBR1-208ENST00000434278 ESDP10768 282 aa13.03□□□□□ -0.32
LMBR1-208ENST00000434278 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
LMBR1-208ENST00000434278 SMDT1Q9H4I9 107 aa13.03□□□□□ -0.32
LMBR1-208ENST00000434278 TMEM242Q9NWH2 141 aa13.03□□□□□ -0.32
LMBR1-208ENST00000434278 FLG2Q5D862 2391 aaPredicted RBP13.02□□□□□ -0.32
LMBR1-208ENST00000434278 hDV102S1A0JD36 115 aa13.02□□□□□ -0.33
LMBR1-208ENST00000434278 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
LMBR1-208ENST00000434278 PLA2G1BP04054 148 aaKnown RBP13.02□□□□□ -0.33
LMBR1-208ENST00000434278 SMIM27A0A1W2PRY6 76 aa13.01□□□□□ -0.33
LMBR1-208ENST00000434278 TRBV27A0A0K0K1C4 114 aa13□□□□□ -0.33
LMBR1-208ENST00000434278 SLPIP03973 132 aa13□□□□□ -0.33
LMBR1-208ENST00000434278 CNBPP62633 177 aaKnown RBP13□□□□□ -0.33
LMBR1-208ENST00000434278 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
LMBR1-208ENST00000434278 SDIM1Q6ZPB5 146 aa12.99□□□□□ -0.33
LMBR1-208ENST00000434278 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
LMBR1-208ENST00000434278 NRACQ8N912 160 aa12.99□□□□□ -0.33
LMBR1-208ENST00000434278 CHCHD10Q8WYQ3 142 aaPredicted RBP12.99□□□□□ -0.33
LMBR1-208ENST00000434278 PANO1I0J062 215 aa12.98□□□□□ -0.33
LMBR1-208ENST00000434278 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
LMBR1-208ENST00000434278 CAMPP49913 170 aa12.97□□□□□ -0.33
LMBR1-208ENST00000434278 KRTAP10-4P60372 401 aaPredicted RBP12.97□□□□□ -0.33
LMBR1-208ENST00000434278 MRPL51Q4U2R6 128 aaKnown RBP12.97□□□□□ -0.33
LMBR1-208ENST00000434278 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
LMBR1-208ENST00000434278 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
LMBR1-208ENST00000434278 TMEM101Q96IK0 257 aa12.97□□□□□ -0.33
LMBR1-208ENST00000434278 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
LMBR1-208ENST00000434278 VCYO14598 125 aa12.96□□□□□ -0.33
LMBR1-208ENST00000434278 AP5S1Q9NUS5 200 aa12.96□□□□□ -0.33
LMBR1-208ENST00000434278 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms