RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.81
COL6A3-207ENST00000433762 SLURP1P55000 103 aa9.96□□□□□ -0.81
COL6A3-207ENST00000433762 IGHV1-58A0A0C4DH39 117 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 A4D1N5 150 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 TCL1BO95988 128 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 IGHV3-33P01772 117 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 C11orf72Q8NBR9 251 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 SPANXCQ9NY87 97 aa9.96□□□□□ -0.82
COL6A3-207ENST00000433762 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 RS1O15537 224 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 INSP01308 110 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 AZU1P20160 251 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 TMEM61Q8N0U2 210 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 CHCHD7Q9BUK0 85 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 TIMM17BO60830 172 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
COL6A3-207ENST00000433762 SVEP1Q4LDE5 3571 aa9.94□□□□□ -0.82
COL6A3-207ENST00000433762 ERG28Q9UKR5 140 aa9.94□□□□□ -0.82
COL6A3-207ENST00000433762 SPG11Q96JI7 2443 aa9.94□□□□□ -0.82
COL6A3-207ENST00000433762 HELZ2Q9BYK8 2649 aaKnown RBP9.94□□□□□ -0.82
COL6A3-207ENST00000433762 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 DEFB114Q30KQ6 69 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 DYNLRB2Q8TF09 96 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 TIRAPP58753 221 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 DEFB113Q30KQ7 82 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 LITAFQ99732 161 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 CRYBG3Q68DQ2 2970 aa9.93□□□□□ -0.82
COL6A3-207ENST00000433762 ZFHX3Q15911 3703 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 GTSF1LQ9H1H1 148 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 SCGB1C2P0DMR2 95 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 IL17DQ8TAD2 202 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
COL6A3-207ENST00000433762 IFITM1P13164 125 aa9.91□□□□□ -0.82
COL6A3-207ENST00000433762 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
COL6A3-207ENST00000433762 LINC01587Q99440 93 aa9.91□□□□□ -0.82
COL6A3-207ENST00000433762 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
COL6A3-207ENST00000433762 CELSR1Q9NYQ6 3014 aa9.91□□□□□ -0.82
COL6A3-207ENST00000433762 EIF4EBP3O60516 100 aaPredicted RBP9.9□□□□□ -0.82
COL6A3-207ENST00000433762 INSL3P51460 131 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 PROK1P58294 105 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 MIAQ16674 131 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 C18orf65Q6ZTR6 163 aa9.9□□□□□ -0.82
COL6A3-207ENST00000433762 MAPK1IP1LQ8NDC0 245 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 ZNF418Q8TF45 676 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-207ENST00000433762 CENPEQ02224 2701 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 TRBV10-1A0A0K0K1A3 114 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 TMEM262E9PQX1 116 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 ATXN8Q156A1 80 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 Q6ZSN1 163 aa9.89□□□□□ -0.83
COL6A3-207ENST00000433762 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
COL6A3-207ENST00000433762 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
COL6A3-207ENST00000433762 FHL3Q13643 280 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 CDIP1Q9H305 208 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 PTPN13Q12923 2485 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 SLC25A20O43772 301 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 HTN1P15515 57 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 CARD19Q96LW7 228 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
COL6A3-207ENST00000433762 SORL1Q92673 2214 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 NDUFA1O15239 70 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 GEMIN7Q9H840 131 aaKnown RBP9.87□□□□□ -0.83
COL6A3-207ENST00000433762 FBN2P35556 2912 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 CELSR2Q9HCU4 2923 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 Q6ZUT4 128 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 VPS13CQ709C8 3753 aa9.87□□□□□ -0.83
COL6A3-207ENST00000433762 HERVK_113P63121 156 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
COL6A3-207ENST00000433762 TRAV8-3A0A0A6YYJ7 113 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 A0A1B0GV72 72 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 CIDEAO60543 219 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 ODF3L2Q3SX64 289 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
COL6A3-207ENST00000433762 POLQO75417 2590 aa9.85□□□□□ -0.83
COL6A3-207ENST00000433762 ABCA12Q86UK0 2595 aa9.85□□□□□ -0.83
COL6A3-207ENST00000433762 IGLV5-39A0A0G2JS06 123 aa9.85□□□□□ -0.83
COL6A3-207ENST00000433762 DAZ2Q13117 558 aaKnown RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 CEMP1Q6PRD7 247 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 IGKV2-29A2NJV5 120 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-207ENST00000433762 LINC01620Q4KN68 170 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms