RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 CFC1P0CG37 223 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 NDUFA11Q86Y39 141 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 FAM104AQ969W3 186 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 SPXQ9BT56 116 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 TMEM223A0PJW6 202 aa12.68□□□□□ -0.38
SEMA3B-204ENST00000433753 CD28P10747 220 aa12.68□□□□□ -0.38
SEMA3B-204ENST00000433753 NFE4Q86UQ8 179 aa12.68□□□□□ -0.38
SEMA3B-204ENST00000433753 RNF152Q8N8N0 203 aa12.68□□□□□ -0.38
SEMA3B-204ENST00000433753 Q96MF0 132 aa12.68□□□□□ -0.38
SEMA3B-204ENST00000433753 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
SEMA3B-204ENST00000433753 RHODO00212 210 aa12.67□□□□□ -0.38
SEMA3B-204ENST00000433753 CFAP126Q5VTH2 177 aa12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 ACANP16112 2415 aa12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 CIDEAO60543 219 aa12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 SMCPP49901 116 aaPredicted RBP12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 LINC01587Q99440 93 aa12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
SEMA3B-204ENST00000433753 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
SEMA3B-204ENST00000433753 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
SEMA3B-204ENST00000433753 FLNAP21333 2647 aaKnown RBP12.65□□□□□ -0.38
SEMA3B-204ENST00000433753 MAP6D1Q9H9H5 199 aa12.65□□□□□ -0.38
SEMA3B-204ENST00000433753 PTH2Q96A98 100 aa12.65□□□□□ -0.38
SEMA3B-204ENST00000433753 DEFB113Q30KQ7 82 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 RAX2Q96IS3 184 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 C1QTNF4Q9BXJ3 329 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 A0A1W2PRX2 142 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 A8MZ25 164 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 M0R2P5 195 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 LEPROTO15243 131 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 A4D1N5 150 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 H7C2G1 150 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 FOXI1Q12951 378 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 ATP6V0E2Q8NHE4 81 aa12.64□□□□□ -0.39
SEMA3B-204ENST00000433753 XCL2Q9UBD3 114 aa12.63□□□□□ -0.39
SEMA3B-204ENST00000433753 MTORP42345 2549 aa12.63□□□□□ -0.39
SEMA3B-204ENST00000433753 UBE2D3P61077 147 aa12.63□□□□□ -0.39
SEMA3B-204ENST00000433753 UBE2D2P62837 147 aa12.63□□□□□ -0.39
SEMA3B-204ENST00000433753 TCL1BO95988 128 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 DEFB114Q30KQ6 69 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 ZNF843Q8N446 348 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 PEMTQ9UBM1 199 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 LYRM7Q5U5X0 104 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
SEMA3B-204ENST00000433753 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
SEMA3B-204ENST00000433753 IGHV3-30-3P0DP02 117 aa12.61□□□□□ -0.39
SEMA3B-204ENST00000433753 A8MWV9 139 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 Q8N2B8 174 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 PRO1854Q9UHT4 67 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 CHCHD7Q9BUK0 85 aa12.6□□□□□ -0.39
SEMA3B-204ENST00000433753 A8MTW9 85 aa12.59□□□□□ -0.39
SEMA3B-204ENST00000433753 SCGB1C2P0DMR2 95 aa12.59□□□□□ -0.39
SEMA3B-204ENST00000433753 LINC00467Q9BRT7 94 aa12.59□□□□□ -0.39
SEMA3B-204ENST00000433753 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 A0A1B0GV72 72 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 Q6ZSV7 163 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 TIMM21Q9BVV7 248 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 NPC2P61916 151 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 KRTAP1-3Q8IUG1 177 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 PYGO1Q9Y3Y4 419 aa12.58□□□□□ -0.4
SEMA3B-204ENST00000433753 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 Q6ZUT4 128 aa12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 UBE2D4Q9Y2X8 147 aa12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 PRSS2P07478 247 aa12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 ODF3L2Q3SX64 289 aa12.57□□□□□ -0.4
SEMA3B-204ENST00000433753 TRBV20-1A0A075B6N2 111 aa12.56□□□□□ -0.4
SEMA3B-204ENST00000433753 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
SEMA3B-204ENST00000433753 WFDC11Q8NEX6 87 aa12.56□□□□□ -0.4
SEMA3B-204ENST00000433753 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
SEMA3B-204ENST00000433753 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
SEMA3B-204ENST00000433753 INSP01308 110 aa12.55□□□□□ -0.4
SEMA3B-204ENST00000433753 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
SEMA3B-204ENST00000433753 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
SEMA3B-204ENST00000433753 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
SEMA3B-204ENST00000433753 TEN1Q86WV5 123 aa12.54□□□□□ -0.4
SEMA3B-204ENST00000433753 PPDPFLQ8WWR9 84 aa12.54□□□□□ -0.4
SEMA3B-204ENST00000433753 TENM4Q6N022 2769 aa12.54□□□□□ -0.4
SEMA3B-204ENST00000433753 C1orf158Q8N1D5 194 aa12.53□□□□□ -0.4
SEMA3B-204ENST00000433753 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
SEMA3B-204ENST00000433753 LITAFQ99732 161 aa12.53□□□□□ -0.4
SEMA3B-204ENST00000433753 ESM1Q9NQ30 184 aa12.52□□□□□ -0.4
SEMA3B-204ENST00000433753 NDUFA12Q9UI09 145 aa12.52□□□□□ -0.4
SEMA3B-204ENST00000433753 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
SEMA3B-204ENST00000433753 IGHV1-58A0A0C4DH39 117 aa12.52□□□□□ -0.41
SEMA3B-204ENST00000433753 DNAJC9-AS1A6NH13 148 aa12.52□□□□□ -0.41
SEMA3B-204ENST00000433753 CKS1BP61024 79 aa12.52□□□□□ -0.41
SEMA3B-204ENST00000433753 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.41
SEMA3B-204ENST00000433753 STHQ8IWL8 128 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms