RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 OR4C5Q8NGB2 326 aa10.59□□□□□ -0.71
RFTN1-203ENST00000432519 NHP2Q9NX24 153 aaKnown RBP10.59□□□□□ -0.71
RFTN1-203ENST00000432519 RBX1P62877 108 aa10.58□□□□□ -0.72
RFTN1-203ENST00000432519 IGLV4-3A0A075B6K6 122 aa10.58□□□□□ -0.72
RFTN1-203ENST00000432519 TMEM170BQ5T4T1 132 aa10.58□□□□□ -0.72
RFTN1-203ENST00000432519 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
RFTN1-203ENST00000432519 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
RFTN1-203ENST00000432519 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
RFTN1-203ENST00000432519 LY6G6DO95868 133 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 TRBV7-3A0A075B6L6 115 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 ZNF815PA8K554 130 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 TNFRSF18Q9Y5U5 241 aa10.57□□□□□ -0.72
RFTN1-203ENST00000432519 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 IGLV1-51P01701 117 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
RFTN1-203ENST00000432519 Q6ZTI0 123 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 ZNF479Q96JC4 524 aa10.56□□□□□ -0.72
RFTN1-203ENST00000432519 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 ATRQ13535 2644 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
RFTN1-203ENST00000432519 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
RFTN1-203ENST00000432519 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
RFTN1-203ENST00000432519 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
RFTN1-203ENST00000432519 RS1O15537 224 aa10.54□□□□□ -0.72
RFTN1-203ENST00000432519 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
RFTN1-203ENST00000432519 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
RFTN1-203ENST00000432519 SPXQ9BT56 116 aa10.53□□□□□ -0.72
RFTN1-203ENST00000432519 PTH2Q96A98 100 aa10.53□□□□□ -0.72
RFTN1-203ENST00000432519 AMELXQ99217 191 aa10.53□□□□□ -0.72
RFTN1-203ENST00000432519 A0A1W2PPM0 123 aa10.52□□□□□ -0.72
RFTN1-203ENST00000432519 GAGE10A6NGK3 116 aa10.52□□□□□ -0.72
RFTN1-203ENST00000432519 ZNF22P17026 224 aaPredicted RBP10.52□□□□□ -0.73
RFTN1-203ENST00000432519 SCGB1D4Q6XE38 83 aa10.52□□□□□ -0.73
RFTN1-203ENST00000432519 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
RFTN1-203ENST00000432519 VCX2Q9H322 139 aa10.52□□□□□ -0.73
RFTN1-203ENST00000432519 PLAC8L1A1L4L8 177 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 NOP10Q9NPE3 64 aaKnown RBP10.51□□□□□ -0.73
RFTN1-203ENST00000432519 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 NDUFA7O95182 113 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
RFTN1-203ENST00000432519 A0A0J9YY99 117 aa10.5□□□□□ -0.73
RFTN1-203ENST00000432519 RHODO00212 210 aa10.5□□□□□ -0.73
RFTN1-203ENST00000432519 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
RFTN1-203ENST00000432519 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
RFTN1-203ENST00000432519 TAL2Q16559 108 aa10.5□□□□□ -0.73
RFTN1-203ENST00000432519 J3QQQ9 107 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 K7EP34 96 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 Q6ZUT4 128 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
RFTN1-203ENST00000432519 HERVK_113P61574 105 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
RFTN1-203ENST00000432519 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
RFTN1-203ENST00000432519 A8MZ25 164 aa10.48□□□□□ -0.73
RFTN1-203ENST00000432519 IGLL5B9A064 214 aa10.48□□□□□ -0.73
RFTN1-203ENST00000432519 TEP1Q99973 2627 aaKnown RBP10.48□□□□□ -0.73
RFTN1-203ENST00000432519 LINC00694P0DN24 101 aa10.47□□□□□ -0.73
RFTN1-203ENST00000432519 SLC25A29Q8N8R3 303 aa10.47□□□□□ -0.73
RFTN1-203ENST00000432519 SRSF9Q13242 221 aaKnown RBP eCLIP10.47□□□□□ -0.73
RFTN1-203ENST00000432519 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
RFTN1-203ENST00000432519 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.74
RFTN1-203ENST00000432519 LOC100131303A0A0U1RQF7 123 aa10.46□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE7O76087 117 aa10.46□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE12FP0CL80 117 aa10.46□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE12GP0CL81 117 aa10.46□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE12IP0CL82 117 aa10.46□□□□□ -0.74
RFTN1-203ENST00000432519 FABP2P12104 132 aa10.45□□□□□ -0.74
RFTN1-203ENST00000432519 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
RFTN1-203ENST00000432519 RNF151Q2KHN1 245 aa10.45□□□□□ -0.74
RFTN1-203ENST00000432519 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
RFTN1-203ENST00000432519 A0A1B0GWB2 263 aa10.45□□□□□ -0.74
RFTN1-203ENST00000432519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
RFTN1-203ENST00000432519 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 PF4P02776 101 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE4Q13068 117 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE5Q13069 117 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 GTF2H5Q6ZYL4 71 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
RFTN1-203ENST00000432519 K7EQD1 137 aa10.43□□□□□ -0.74
RFTN1-203ENST00000432519 LEPROTO15243 131 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms