RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 GNG4P50150 75 aa8.65□□□□□ -1.02
GCSHP3-201ENST00000431120 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
GCSHP3-201ENST00000431120 COTL1Q14019 142 aa8.65□□□□□ -1.02
GCSHP3-201ENST00000431120 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
GCSHP3-201ENST00000431120 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
GCSHP3-201ENST00000431120 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.03
GCSHP3-201ENST00000431120 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
GCSHP3-201ENST00000431120 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
GCSHP3-201ENST00000431120 NTF3P20783 257 aa8.63□□□□□ -1.03
GCSHP3-201ENST00000431120 AMTP48728 403 aa8.63□□□□□ -1.03
GCSHP3-201ENST00000431120 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
GCSHP3-201ENST00000431120 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
GCSHP3-201ENST00000431120 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
GCSHP3-201ENST00000431120 A0A087WYN8 130 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 RAB19A4D1S5 217 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 SULT1A2P50226 295 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
GCSHP3-201ENST00000431120 H7C423 109 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 NCR2O95944 276 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 SLPIP03973 132 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 CTRLP40313 264 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
GCSHP3-201ENST00000431120 TRBV20OR9-2A0A075B6H5 130 aa8.6□□□□□ -1.03
GCSHP3-201ENST00000431120 RPS10P46783 165 aaKnown RBP8.6□□□□□ -1.03
GCSHP3-201ENST00000431120 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
GCSHP3-201ENST00000431120 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
GCSHP3-201ENST00000431120 BCL2P10415 239 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 TWIST1Q15672 202 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 NUDT11Q96G61 164 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
GCSHP3-201ENST00000431120 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
GCSHP3-201ENST00000431120 NDUFS6O75380 124 aaKnown RBP8.58□□□□□ -1.04
GCSHP3-201ENST00000431120 SMIM15Q7Z3B0 74 aa8.58□□□□□ -1.04
GCSHP3-201ENST00000431120 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
GCSHP3-201ENST00000431120 PKIGQ9Y2B9 76 aa8.58□□□□□ -1.04
GCSHP3-201ENST00000431120 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
GCSHP3-201ENST00000431120 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
GCSHP3-201ENST00000431120 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
GCSHP3-201ENST00000431120 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
GCSHP3-201ENST00000431120 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
GCSHP3-201ENST00000431120 COX6A2Q02221 97 aa8.56□□□□□ -1.04
GCSHP3-201ENST00000431120 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
GCSHP3-201ENST00000431120 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
GCSHP3-201ENST00000431120 APCSP02743 223 aa8.55□□□□□ -1.04
GCSHP3-201ENST00000431120 PHOX2AO14813 284 aa8.54□□□□□ -1.04
GCSHP3-201ENST00000431120 FGF6P10767 208 aa8.54□□□□□ -1.04
GCSHP3-201ENST00000431120 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
GCSHP3-201ENST00000431120 Q6ZNX1 250 aa8.54□□□□□ -1.04
GCSHP3-201ENST00000431120 SLC51BQ86UW2 128 aa8.54□□□□□ -1.04
GCSHP3-201ENST00000431120 TRAV26-2A0A0B4J265 109 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 PRSS3P2Q8NHM4 247 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 RNASE7Q9H1E1 156 aaKnown RBP8.53□□□□□ -1.04
GCSHP3-201ENST00000431120 A8MWL6 223 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 I3L3M4 83 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 K7EN84 100 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 FOXA3P55318 350 aaPredicted RBP8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 FOXI1Q12951 378 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 STPG4Q8N801 248 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 LINC01600Q96MT4 127 aa8.52□□□□□ -1.05
GCSHP3-201ENST00000431120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 IGKV2-29A2NJV5 120 aaPredicted RBP8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 TMEM250H0YL14 139 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 PMCHP20382 165 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 PRR3P79522 188 aaKnown RBP8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 CT83Q5H943 113 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 FAM231DQ6ZW35 169 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 TCTE3Q8IZS6 198 aa8.51□□□□□ -1.05
GCSHP3-201ENST00000431120 TNXBP22105 4242 aa8.5□□□□□ -1.05
GCSHP3-201ENST00000431120 IGHV1-58A0A0C4DH39 117 aa8.5□□□□□ -1.05
GCSHP3-201ENST00000431120 LINC00959A0A1B0GUT2 108 aa8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 GATCO43716 136 aaKnown RBP8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 ESDP10768 282 aa8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 BORCS7Q96B45 105 aa8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
GCSHP3-201ENST00000431120 LRP2P98164 4655 aa8.48□□□□□ -1.05
GCSHP3-201ENST00000431120 A0A096LNI7 61 aa8.48□□□□□ -1.05
GCSHP3-201ENST00000431120 XCL1P47992 114 aa8.48□□□□□ -1.05
GCSHP3-201ENST00000431120 SS18Q15532 418 aa8.48□□□□□ -1.05
GCSHP3-201ENST00000431120 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
GCSHP3-201ENST00000431120 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms