RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TRGC1P0CF51 173 aa10.43□□□□□ -0.74
PTPRA-206ENST00000430705 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
PTPRA-206ENST00000430705 NIT2Q9NQR4 276 aa10.43□□□□□ -0.74
PTPRA-206ENST00000430705 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 SLC51BQ86UW2 128 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 GTSF1Q8WW33 167 aa10.42□□□□□ -0.74
PTPRA-206ENST00000430705 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
PTPRA-206ENST00000430705 WDR73Q6P4I2 378 aa10.41□□□□□ -0.74
PTPRA-206ENST00000430705 OCC1Q8TAD7 63 aa10.41□□□□□ -0.74
PTPRA-206ENST00000430705 RPP21Q9H633 154 aaKnown RBP10.41□□□□□ -0.74
PTPRA-206ENST00000430705 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-206ENST00000430705 RPL37AP61513 92 aaKnown RBP10.4□□□□□ -0.74
PTPRA-206ENST00000430705 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
PTPRA-206ENST00000430705 TNXBP22105 4242 aa10.4□□□□□ -0.75
PTPRA-206ENST00000430705 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
PTPRA-206ENST00000430705 TWIST1Q15672 202 aa10.39□□□□□ -0.75
PTPRA-206ENST00000430705 C15orf56Q8N910 161 aa10.39□□□□□ -0.75
PTPRA-206ENST00000430705 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
PTPRA-206ENST00000430705 BIN3Q9NQY0 253 aa10.39□□□□□ -0.75
PTPRA-206ENST00000430705 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
PTPRA-206ENST00000430705 AMTP48728 403 aa10.38□□□□□ -0.75
PTPRA-206ENST00000430705 Q6ZNX1 250 aa10.38□□□□□ -0.75
PTPRA-206ENST00000430705 CLRN3Q8NCR9 226 aa10.38□□□□□ -0.75
PTPRA-206ENST00000430705 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
PTPRA-206ENST00000430705 OXTP01178 125 aa10.37□□□□□ -0.75
PTPRA-206ENST00000430705 CHTF8P0CG12 524 aa10.37□□□□□ -0.75
PTPRA-206ENST00000430705 COTL1Q14019 142 aa10.37□□□□□ -0.75
PTPRA-206ENST00000430705 TAGLN2P37802 199 aaKnown RBP10.36□□□□□ -0.75
PTPRA-206ENST00000430705 UBE2L6O14933 153 aa10.35□□□□□ -0.75
PTPRA-206ENST00000430705 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
PTPRA-206ENST00000430705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-206ENST00000430705 IGKV2-29A2NJV5 120 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-206ENST00000430705 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
PTPRA-206ENST00000430705 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
PTPRA-206ENST00000430705 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
PTPRA-206ENST00000430705 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
PTPRA-206ENST00000430705 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
PTPRA-206ENST00000430705 SPACA4Q8TDM5 124 aa10.33□□□□□ -0.76
PTPRA-206ENST00000430705 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
PTPRA-206ENST00000430705 IGKV3OR2-268A0A0C4DH90 116 aa10.32□□□□□ -0.76
PTPRA-206ENST00000430705 A0A087WYN8 130 aa10.31□□□□□ -0.76
PTPRA-206ENST00000430705 FAM231BA6NCW3 169 aa10.31□□□□□ -0.76
PTPRA-206ENST00000430705 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
PTPRA-206ENST00000430705 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
PTPRA-206ENST00000430705 NCR2O95944 276 aa10.31□□□□□ -0.76
PTPRA-206ENST00000430705 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
PTPRA-206ENST00000430705 APCSP02743 223 aa10.3□□□□□ -0.76
PTPRA-206ENST00000430705 FGF6P10767 208 aa10.3□□□□□ -0.76
PTPRA-206ENST00000430705 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
PTPRA-206ENST00000430705 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
PTPRA-206ENST00000430705 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-206ENST00000430705 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
PTPRA-206ENST00000430705 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
PTPRA-206ENST00000430705 TSHBP01222 138 aa10.29□□□□□ -0.76
PTPRA-206ENST00000430705 FOXI1Q12951 378 aa10.29□□□□□ -0.76
PTPRA-206ENST00000430705 CT83Q5H943 113 aa10.29□□□□□ -0.76
PTPRA-206ENST00000430705 hCG_2014768A0A024R1R8 64 aa10.28□□□□□ -0.76
PTPRA-206ENST00000430705 GVQW2A0A096LPI5 108 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-206ENST00000430705 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-206ENST00000430705 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
PTPRA-206ENST00000430705 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
PTPRA-206ENST00000430705 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
PTPRA-206ENST00000430705 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
PTPRA-206ENST00000430705 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
PTPRA-206ENST00000430705 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
PTPRA-206ENST00000430705 A8MWL6 223 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 H7C423 109 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 ESDP10768 282 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 CEBPGP53567 150 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 AMMECR1LQ6DCA0 310 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.77
PTPRA-206ENST00000430705 I3L3M4 83 aa10.26□□□□□ -0.77
PTPRA-206ENST00000430705 COX6A2Q02221 97 aa10.26□□□□□ -0.77
PTPRA-206ENST00000430705 TEX261Q6UWH6 196 aa10.26□□□□□ -0.77
PTPRA-206ENST00000430705 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
PTPRA-206ENST00000430705 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
PTPRA-206ENST00000430705 OR5A1Q8NGJ0 315 aa10.25□□□□□ -0.77
PTPRA-206ENST00000430705 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
PTPRA-206ENST00000430705 PHOX2AO14813 284 aa10.24□□□□□ -0.77
PTPRA-206ENST00000430705 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
PTPRA-206ENST00000430705 ZNF25P17030 456 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-206ENST00000430705 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
PTPRA-206ENST00000430705 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
PTPRA-206ENST00000430705 TSKUQ8WUA8 353 aa10.24□□□□□ -0.77
PTPRA-206ENST00000430705 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
PTPRA-206ENST00000430705 TMEM191AQ9H0A3 160 aa10.24□□□□□ -0.77
PTPRA-206ENST00000430705 A0A096LNI7 61 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 NDUFS6O75380 124 aaKnown RBP10.23□□□□□ -0.77
PTPRA-206ENST00000430705 RAB4AP20338 218 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 PMCHP20382 165 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 XCL1P47992 114 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 Q6ZRU5 148 aa10.23□□□□□ -0.77
PTPRA-206ENST00000430705 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms