RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TMEM243Q9BU79 118 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 RPP21Q9H633 154 aaKnown RBP7.55□□□□□ -1.2
HDAC4-202ENST00000430200 UBR4Q5T4S7 5183 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 J3QL48 77 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 C14orf177Q52M58 125 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 EIF5AL1Q6IS14 154 aaKnown RBP7.54□□□□□ -1.2
HDAC4-202ENST00000430200 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 NIT2Q9NQR4 276 aa7.54□□□□□ -1.2
HDAC4-202ENST00000430200 F2Z2F3 143 aa7.53□□□□□ -1.2
HDAC4-202ENST00000430200 H7C1H1 209 aa7.53□□□□□ -1.2
HDAC4-202ENST00000430200 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
HDAC4-202ENST00000430200 PKIAP61925 76 aa7.53□□□□□ -1.2
HDAC4-202ENST00000430200 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
HDAC4-202ENST00000430200 TNXBP22105 4242 aa7.52□□□□□ -1.21
HDAC4-202ENST00000430200 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
HDAC4-202ENST00000430200 TEX46H3BTG2 121 aa7.52□□□□□ -1.21
HDAC4-202ENST00000430200 AMTP48728 403 aa7.52□□□□□ -1.21
HDAC4-202ENST00000430200 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
HDAC4-202ENST00000430200 TWIST1Q15672 202 aa7.52□□□□□ -1.21
HDAC4-202ENST00000430200 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
HDAC4-202ENST00000430200 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
HDAC4-202ENST00000430200 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
HDAC4-202ENST00000430200 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
HDAC4-202ENST00000430200 RPL37AP61513 92 aaKnown RBP7.51□□□□□ -1.21
HDAC4-202ENST00000430200 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
HDAC4-202ENST00000430200 LYPD6BQ8NI32 183 aa7.51□□□□□ -1.21
HDAC4-202ENST00000430200 hDV102S1A0JD36 115 aa7.5□□□□□ -1.21
HDAC4-202ENST00000430200 COTL1Q14019 142 aa7.5□□□□□ -1.21
HDAC4-202ENST00000430200 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
HDAC4-202ENST00000430200 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
HDAC4-202ENST00000430200 AKAP14Q86UN6 197 aa7.5□□□□□ -1.21
HDAC4-202ENST00000430200 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
HDAC4-202ENST00000430200 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
HDAC4-202ENST00000430200 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 GAGE12HA6NDE8 117 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 TMEM250H0YL14 139 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
HDAC4-202ENST00000430200 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 SPACA4Q8TDM5 124 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 BIN3Q9NQY0 253 aa7.48□□□□□ -1.21
HDAC4-202ENST00000430200 A0A1B0GVG6 124 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 UBE2L6O14933 153 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 GATCO43716 136 aaKnown RBP7.47□□□□□ -1.21
HDAC4-202ENST00000430200 TSHBP01222 138 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
HDAC4-202ENST00000430200 CEBPGP53567 150 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 LINC01551Q86U37 167 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
HDAC4-202ENST00000430200 A0A087WYN8 130 aa7.46□□□□□ -1.22
HDAC4-202ENST00000430200 FGF6P10767 208 aa7.46□□□□□ -1.22
HDAC4-202ENST00000430200 CLRN3Q8NCR9 226 aa7.46□□□□□ -1.22
HDAC4-202ENST00000430200 CHCHD10Q8WYQ3 142 aaPredicted RBP7.46□□□□□ -1.22
HDAC4-202ENST00000430200 TMEM242Q9NWH2 141 aa7.46□□□□□ -1.22
HDAC4-202ENST00000430200 SMKR1H3BMG3 65 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 NCR2O95944 276 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 APCSP02743 223 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 ESDP10768 282 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 FOXI1Q12951 378 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 CT83Q5H943 113 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 SMIM7Q9BQ49 75 aa7.45□□□□□ -1.22
HDAC4-202ENST00000430200 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
HDAC4-202ENST00000430200 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 C9JQL5 133 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 OXTP01178 125 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
HDAC4-202ENST00000430200 BLOC1S1P78537 153 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 RNASEKQ6P5S7 137 aaKnown RBP7.44□□□□□ -1.22
HDAC4-202ENST00000430200 AMN1Q8IY45 258 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 PRSS3P2Q8NHM4 247 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 FAM210AQ96ND0 272 aa7.44□□□□□ -1.22
HDAC4-202ENST00000430200 A8MWL6 223 aa7.43□□□□□ -1.22
HDAC4-202ENST00000430200 COX6A2Q02221 97 aa7.43□□□□□ -1.22
HDAC4-202ENST00000430200 V9GYV3 84 aa7.43□□□□□ -1.22
HDAC4-202ENST00000430200 LRP2P98164 4655 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 A0A096LNI7 61 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 PHOX2AO14813 284 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 XCL1P47992 114 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
HDAC4-202ENST00000430200 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 NRACQ8N912 160 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
HDAC4-202ENST00000430200 IGKV2-24A0A0C4DH68 120 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 I3L3M4 83 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 CCL25O15444 150 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 RAB4AP20338 218 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 SRSF3P84103 164 aaKnown RBP7.41□□□□□ -1.22
HDAC4-202ENST00000430200 ODF1Q14990 250 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 ISOC2Q96AB3 205 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 EIF5A2Q9GZV4 153 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms