RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ZNF815PA8K554 130 aa11.71□□□□□ -0.53
MBD4-203ENST00000429544 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
MBD4-203ENST00000429544 GIG44P09565 113 aaPredicted RBP11.7□□□□□ -0.54
MBD4-203ENST00000429544 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
MBD4-203ENST00000429544 OR4C5Q8NGB2 326 aa11.7□□□□□ -0.54
MBD4-203ENST00000429544 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
MBD4-203ENST00000429544 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 H3BUT2 72 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 TM2D2Q9BX73 214 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 TAL2Q16559 108 aa11.69□□□□□ -0.54
MBD4-203ENST00000429544 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
MBD4-203ENST00000429544 INAFM1C9JVW0 142 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 K7ERJ3 54 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 PF4P02776 101 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
MBD4-203ENST00000429544 Q6ZTI0 123 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 VCX2Q9H322 139 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
MBD4-203ENST00000429544 TRBV7-3A0A075B6L6 115 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
MBD4-203ENST00000429544 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
MBD4-203ENST00000429544 ZNF479Q96JC4 524 aa11.67□□□□□ -0.54
MBD4-203ENST00000429544 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
MBD4-203ENST00000429544 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
MBD4-203ENST00000429544 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
MBD4-203ENST00000429544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
MBD4-203ENST00000429544 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
MBD4-203ENST00000429544 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
MBD4-203ENST00000429544 SCGB1D4Q6XE38 83 aa11.66□□□□□ -0.54
MBD4-203ENST00000429544 FAM104AQ969W3 186 aa11.66□□□□□ -0.54
MBD4-203ENST00000429544 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
MBD4-203ENST00000429544 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
MBD4-203ENST00000429544 COTL1Q14019 142 aa11.65□□□□□ -0.54
MBD4-203ENST00000429544 LINC00482Q8N8I6 264 aa11.65□□□□□ -0.54
MBD4-203ENST00000429544 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
MBD4-203ENST00000429544 AMELXQ99217 191 aa11.64□□□□□ -0.55
MBD4-203ENST00000429544 TRAV4A0A0B4J268 109 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 TMEM223A0PJW6 202 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 C16orf74Q96GX8 76 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 C1QTNF4Q9BXJ3 329 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
MBD4-203ENST00000429544 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 J3QQQ9 107 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 K7EQD1 137 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 CSNK1G2-AS1Q8NCQ2 148 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 LGALS3P17931 250 aaKnown RBP11.62□□□□□ -0.55
MBD4-203ENST00000429544 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
MBD4-203ENST00000429544 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
MBD4-203ENST00000429544 C12orf74Q32Q52 190 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 Q6ZUT4 128 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 LEPROTO15243 131 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 GAGE7O76087 117 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 GAGE12FP0CL80 117 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 GAGE12GP0CL81 117 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 GAGE12IP0CL82 117 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 CRYBA4P53673 196 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 RRN3P1Q2M238 152 aa11.61□□□□□ -0.55
MBD4-203ENST00000429544 C2CD3Q4AC94 2353 aa11.6□□□□□ -0.55
MBD4-203ENST00000429544 A0A0J9YY99 117 aa11.6□□□□□ -0.55
MBD4-203ENST00000429544 K7EP34 96 aa11.6□□□□□ -0.55
MBD4-203ENST00000429544 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
MBD4-203ENST00000429544 GTF2H5Q6ZYL4 71 aa11.6□□□□□ -0.55
MBD4-203ENST00000429544 NSD1Q96L73 2696 aaPredicted RBP11.6□□□□□ -0.55
MBD4-203ENST00000429544 RPL36AP83881 106 aaKnown RBP11.6□□□□□ -0.55
MBD4-203ENST00000429544 RPL36ALQ969Q0 106 aaKnown RBP11.6□□□□□ -0.55
MBD4-203ENST00000429544 MRPS36P82909 103 aaKnown RBP11.59□□□□□ -0.55
MBD4-203ENST00000429544 SLC25A29Q8N8R3 303 aa11.59□□□□□ -0.55
MBD4-203ENST00000429544 TRGV2A0A075B6R0 118 aa11.59□□□□□ -0.55
MBD4-203ENST00000429544 FABP2P12104 132 aa11.59□□□□□ -0.55
MBD4-203ENST00000429544 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
MBD4-203ENST00000429544 FN1P02751 2386 aaKnown RBP11.58□□□□□ -0.56
MBD4-203ENST00000429544 TRBV10-1A0A0K0K1A3 114 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 GAGE4Q13068 117 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 GAGE5Q13069 117 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
MBD4-203ENST00000429544 IGLL5B9A064 214 aa11.57□□□□□ -0.56
MBD4-203ENST00000429544 OR5A1Q8NGJ0 315 aa11.57□□□□□ -0.56
MBD4-203ENST00000429544 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
MBD4-203ENST00000429544 UBE2D3P61077 147 aa11.56□□□□□ -0.56
MBD4-203ENST00000429544 UBE2D2P62837 147 aa11.56□□□□□ -0.56
MBD4-203ENST00000429544 OVOL2Q9BRP0 275 aa11.56□□□□□ -0.56
MBD4-203ENST00000429544 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
MBD4-203ENST00000429544 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
MBD4-203ENST00000429544 DGAT2L7PQ6IED9 249 aa11.55□□□□□ -0.56
MBD4-203ENST00000429544 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
MBD4-203ENST00000429544 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms