RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 C3orf22Q8N5N4 141 aa12.04□□□□□ -0.48
RHBDF1-204ENST00000428730 HERVK_113P63121 156 aa12.03□□□□□ -0.48
RHBDF1-204ENST00000428730 DEFB123Q8N688 67 aa12.02□□□□□ -0.48
RHBDF1-204ENST00000428730 DCANP1Q8TF63 244 aa12.02□□□□□ -0.48
RHBDF1-204ENST00000428730 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.48
RHBDF1-204ENST00000428730 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
RHBDF1-204ENST00000428730 UBTD1Q9HAC8 227 aa12.02□□□□□ -0.49
RHBDF1-204ENST00000428730 IGHG2P01859 326 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 NPFFO15130 113 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 SPINK13Q1W4C9 94 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 Q8N2B8 174 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 NRGNQ92686 78 aa12.01□□□□□ -0.49
RHBDF1-204ENST00000428730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 HTN1P15515 57 aa12□□□□□ -0.49
RHBDF1-204ENST00000428730 ATP5J2P56134 94 aa12□□□□□ -0.49
RHBDF1-204ENST00000428730 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
RHBDF1-204ENST00000428730 PF4V1P10720 104 aa12□□□□□ -0.49
RHBDF1-204ENST00000428730 DAZ2Q13117 558 aaKnown RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 DAZ4Q86SG3 579 aaKnown RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 DAZ1Q9NQZ3 744 aaKnown RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 DAZ3Q9NR90 486 aaKnown RBP12□□□□□ -0.49
RHBDF1-204ENST00000428730 MOB4Q9Y3A3 225 aa11.99□□□□□ -0.49
RHBDF1-204ENST00000428730 KNCNA6PVL3 124 aa11.99□□□□□ -0.49
RHBDF1-204ENST00000428730 LY6EQ16553 131 aa11.99□□□□□ -0.49
RHBDF1-204ENST00000428730 BRD3OSQ6XYD6 125 aa11.99□□□□□ -0.49
RHBDF1-204ENST00000428730 DOPEY2Q9Y3R5 2298 aa11.99□□□□□ -0.49
RHBDF1-204ENST00000428730 CCL21O00585 134 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 PRM2P04554 102 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 IMUPQ9GZP8 106 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 UQCRQO14949 82 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 LINC00643Q86TS7 51 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
RHBDF1-204ENST00000428730 IGHV1OR15-1A0A075B7D0 117 aa11.97□□□□□ -0.49
RHBDF1-204ENST00000428730 RS1O15537 224 aa11.97□□□□□ -0.49
RHBDF1-204ENST00000428730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.97□□□□□ -0.49
RHBDF1-204ENST00000428730 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
RHBDF1-204ENST00000428730 CYSTM1Q9H1C7 97 aa11.97□□□□□ -0.49
RHBDF1-204ENST00000428730 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
RHBDF1-204ENST00000428730 ACYP1P07311 99 aa11.96□□□□□ -0.49
RHBDF1-204ENST00000428730 LINC00526Q96FQ7 95 aa11.96□□□□□ -0.49
RHBDF1-204ENST00000428730 C22orf24Q9Y442 160 aa11.96□□□□□ -0.49
RHBDF1-204ENST00000428730 ZNF292O60281 2723 aa11.96□□□□□ -0.5
RHBDF1-204ENST00000428730 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.5
RHBDF1-204ENST00000428730 A0A1W2PPR1 153 aa11.96□□□□□ -0.5
RHBDF1-204ENST00000428730 COX7A2LO14548 114 aa11.96□□□□□ -0.5
RHBDF1-204ENST00000428730 LINC00308Q8TCZ7 52 aa11.96□□□□□ -0.5
RHBDF1-204ENST00000428730 SOSTDC1Q6X4U4 206 aa11.95□□□□□ -0.5
RHBDF1-204ENST00000428730 FAM218AQ96MZ4 157 aa11.95□□□□□ -0.5
RHBDF1-204ENST00000428730 CEP295Q9C0D2 2601 aa11.95□□□□□ -0.5
RHBDF1-204ENST00000428730 ZFHX2Q9C0A1 2572 aaPredicted RBP11.95□□□□□ -0.5
RHBDF1-204ENST00000428730 LY6DQ14210 128 aa11.95□□□□□ -0.5
RHBDF1-204ENST00000428730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.54e-7■■■■■ 29.3
RHBDF1-204ENST00000428730 TIRAPP58753 221 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 Q6ZSN1 163 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 MAP1AP78559 2803 aaPredicted RBP11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 BAALC-AS2P0C853 105 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 GAGE2AQ6NT46 116 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
RHBDF1-204ENST00000428730 BLCAPP62952 87 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 Q9H8V8 135 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 CREBBPQ92793 2442 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 BPESC1Q9GZL8 116 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 Q9HAA7 133 aa11.93□□□□□ -0.5
RHBDF1-204ENST00000428730 hADV29S1A0JD25 119 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 COX6A2Q02221 97 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 BEAN1Q3B7T3 259 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 RBMY1A1P0DJD3 496 aaKnown RBP11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 RBMY1CP0DJD4 496 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 RBMY1FQ15415 496 aaKnown RBP11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 CRYBG3Q68DQ2 2970 aa11.92□□□□□ -0.5
RHBDF1-204ENST00000428730 NDUFA1O15239 70 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 ATRXP46100 2492 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 CUBNO60494 3623 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 TIMM17BO60830 172 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 COX7CP15954 63 aa11.91□□□□□ -0.5
RHBDF1-204ENST00000428730 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.5
RHBDF1-204ENST00000428730 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
RHBDF1-204ENST00000428730 J3KT08 172 aa11.9□□□□□ -0.5
RHBDF1-204ENST00000428730 LMO4P61968 165 aa11.9□□□□□ -0.5
RHBDF1-204ENST00000428730 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
RHBDF1-204ENST00000428730 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
RHBDF1-204ENST00000428730 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
RHBDF1-204ENST00000428730 PEMTQ9UBM1 199 aa11.89□□□□□ -0.51
RHBDF1-204ENST00000428730 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
RHBDF1-204ENST00000428730 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
RHBDF1-204ENST00000428730 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
RHBDF1-204ENST00000428730 PIK3CD-AS1Q5SR53 167 aa11.87□□□□□ -0.51
RHBDF1-204ENST00000428730 CSMD2Q7Z408 3487 aa11.87□□□□□ -0.51
RHBDF1-204ENST00000428730 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
RHBDF1-204ENST00000428730 C5orf47Q569G3 176 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms