RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 POLR2KP53803 58 aaKnown RBP5.48□□□□□ -1.53
HMGA1P4-201ENST00000428643 TMEM97Q5BJF2 176 aa5.48□□□□□ -1.53
HMGA1P4-201ENST00000428643 IGLV2-18A0A075B6J9 118 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 IGHV1-24A0A0C4DH33 117 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 PRSS47A8MTI9 375 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 C3orf84H3BNL1 204 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 SERF1AO75920 110 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 CCL18P55774 89 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 TCTAP57738 103 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 Q0VG73 95 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 LYPD5Q6UWN5 251 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 UBE2DNLQ8IWF7 75 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 CHCHD5Q9BSY4 110 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 TMEM243Q9BU79 118 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 APLNQ9ULZ1 77 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 TMA7Q9Y2S6 64 aaKnown RBP5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 NACAE9PAV3 2078 aa5.47□□□□□ -1.53
HMGA1P4-201ENST00000428643 TRBV25-1A0A075B6N4 114 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 TRAV8-6A0A0B4J262 113 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 K7EMI3 77 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 UBE2L6O14933 153 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 HSBP1O75506 76 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 LINC00614P0C842 121 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 TIRAPP58753 221 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 LAGE3Q14657 143 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 ESRGQ1W209 222 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 ORMDL2Q53FV1 153 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 LELP1Q5T871 98 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 NTM-AS1Q6ZSK4 140 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 NIT1Q86X76 327 aa5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 CHCHD1Q96BP2 118 aaKnown RBP5.46□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 S100A6P06703 90 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 NDUFA6P56556 154 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 GAGE6Q13070 117 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 PMCHL1Q16048 86 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 CASC10Q5T4H9 136 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 URB1-AS1Q96HZ7 61 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 LINC00588Q9Y4M8 146 aa5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
HMGA1P4-201ENST00000428643 TMEM262E9PQX1 116 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 HBDP02042 147 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 LINC00310P59036 64 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 AMMECR1LQ6DCA0 310 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 TMEM18Q96B42 140 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 CYSLTR1Q9Y271 337 aa5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 DYNC2H1Q8NCM8 4307 aaKnown RBP5.44□□□□□ -1.54
HMGA1P4-201ENST00000428643 A0A087WX48 190 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 LINC01546A6NGU7 62 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 FGF6P10767 208 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 ESDP10768 282 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 G0S2P27469 103 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 PKIAP61925 76 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 RPL39P62891 51 aaKnown RBP5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 C2orf66Q6UXQ4 117 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 WFDC10BQ8IUB3 73 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 C20orf203Q8NBC4 194 aa5.43□□□□□ -1.54
HMGA1P4-201ENST00000428643 SMAGPQ0VAQ4 97 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 PDZD11Q5EBL8 140 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 DGAT2L7PQ6IED9 249 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 FAM19A2Q8N3H0 131 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 OR5A1Q8NGJ0 315 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 TMEM101Q96IK0 257 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 SPANXA1Q9NS26 97 aa5.42□□□□□ -1.54
HMGA1P4-201ENST00000428643 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 H7C423 109 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 SIVA1O15304 175 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 NUPR1O60356 82 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGHV3-30P01768 117 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGHV3-33P01772 117 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGHV3-30-3P0DP02 117 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 IGHV3-30-5P0DP03 117 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 ZNF25P17030 456 aaPredicted RBP5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 RBX1P62877 108 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 MPV17L2Q567V2 206 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 Q8N3U1 123 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 Q8N976 141 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 UPK3BQ9BT76 320 aa5.41□□□□□ -1.54
HMGA1P4-201ENST00000428643 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 A0A096LNJ9 63 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 LINC01549A6NIU2 74 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 LY6G6CO95867 125 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 S100A2P29034 98 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 Q6ZN92 141 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 Q6ZUT4 128 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 UBE2D4Q9Y2X8 147 aa5.4□□□□□ -1.54
HMGA1P4-201ENST00000428643 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms