RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.49
PSPC1-202ENST00000427943 GATD1Q8NB37 220 aa11.96□□□□□ -0.49
PSPC1-202ENST00000427943 GFRA4Q9GZZ7 299 aa11.96□□□□□ -0.49
PSPC1-202ENST00000427943 PRSS1P07477 247 aa11.95□□□□□ -0.5
PSPC1-202ENST00000427943 AMTP48728 403 aa11.95□□□□□ -0.5
PSPC1-202ENST00000427943 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
PSPC1-202ENST00000427943 COTL1Q14019 142 aa11.95□□□□□ -0.5
PSPC1-202ENST00000427943 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
PSPC1-202ENST00000427943 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
PSPC1-202ENST00000427943 UBE2L6O14933 153 aa11.94□□□□□ -0.5
PSPC1-202ENST00000427943 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
PSPC1-202ENST00000427943 RPL39LQ96EH5 51 aaKnown RBP11.94□□□□□ -0.5
PSPC1-202ENST00000427943 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
PSPC1-202ENST00000427943 SMIM15Q7Z3B0 74 aa11.93□□□□□ -0.5
PSPC1-202ENST00000427943 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
PSPC1-202ENST00000427943 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
PSPC1-202ENST00000427943 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
PSPC1-202ENST00000427943 A0A1B0GVG6 124 aa11.92□□□□□ -0.5
PSPC1-202ENST00000427943 A8MWL6 223 aa11.92□□□□□ -0.5
PSPC1-202ENST00000427943 SMIM7Q9BQ49 75 aa11.92□□□□□ -0.5
PSPC1-202ENST00000427943 FAM210AQ96ND0 272 aa11.9□□□□□ -0.5
PSPC1-202ENST00000427943 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
PSPC1-202ENST00000427943 CT83Q5H943 113 aa11.89□□□□□ -0.51
PSPC1-202ENST00000427943 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
PSPC1-202ENST00000427943 HERC1Q15751 4861 aa11.89□□□□□ -0.51
PSPC1-202ENST00000427943 IGKV3OR2-268A0A0C4DH90 116 aa11.88□□□□□ -0.51
PSPC1-202ENST00000427943 ZNF727A8MUV8 499 aa11.88□□□□□ -0.51
PSPC1-202ENST00000427943 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
PSPC1-202ENST00000427943 DGAT2L7PQ6IED9 249 aa11.88□□□□□ -0.51
PSPC1-202ENST00000427943 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
PSPC1-202ENST00000427943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
PSPC1-202ENST00000427943 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
PSPC1-202ENST00000427943 SDHAF1A6NFY7 115 aa11.87□□□□□ -0.51
PSPC1-202ENST00000427943 APCSP02743 223 aa11.87□□□□□ -0.51
PSPC1-202ENST00000427943 C9orf163Q8N9P6 203 aa11.87□□□□□ -0.51
PSPC1-202ENST00000427943 hDV102S1A0JD36 115 aa11.86□□□□□ -0.51
PSPC1-202ENST00000427943 HIGD1CA8MV81 97 aa11.86□□□□□ -0.51
PSPC1-202ENST00000427943 GAS8-AS1O95177 125 aa11.86□□□□□ -0.51
PSPC1-202ENST00000427943 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
PSPC1-202ENST00000427943 TSKUQ8WUA8 353 aa11.86□□□□□ -0.51
PSPC1-202ENST00000427943 NCR2O95944 276 aa11.85□□□□□ -0.51
PSPC1-202ENST00000427943 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
PSPC1-202ENST00000427943 TEX261Q6UWH6 196 aa11.85□□□□□ -0.51
PSPC1-202ENST00000427943 CLRN3Q8NCR9 226 aa11.85□□□□□ -0.51
PSPC1-202ENST00000427943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-202ENST00000427943 A0A1B0GUT8 65 aa11.84□□□□□ -0.51
PSPC1-202ENST00000427943 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
PSPC1-202ENST00000427943 KRTAP10-4P60372 401 aaPredicted RBP11.84□□□□□ -0.51
PSPC1-202ENST00000427943 OSTCQ9NRP0 149 aa11.84□□□□□ -0.51
PSPC1-202ENST00000427943 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
PSPC1-202ENST00000427943 PANO1I0J062 215 aa11.83□□□□□ -0.52
PSPC1-202ENST00000427943 PMCHP20382 165 aa11.83□□□□□ -0.52
PSPC1-202ENST00000427943 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 J3QL48 77 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 FGF6P10767 208 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
PSPC1-202ENST00000427943 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 TMEM191AQ9H0A3 160 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 V9GYV3 84 aa11.82□□□□□ -0.52
PSPC1-202ENST00000427943 I3L3M4 83 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
PSPC1-202ENST00000427943 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 AMN1Q8IY45 258 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 ST20Q9HBF5 79 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
PSPC1-202ENST00000427943 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 H7C423 109 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 TSHBP01222 138 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 SLPIP03973 132 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 RAB4AP20338 218 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
PSPC1-202ENST00000427943 C9JQL5 133 aa11.79□□□□□ -0.52
PSPC1-202ENST00000427943 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
PSPC1-202ENST00000427943 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
PSPC1-202ENST00000427943 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 RPL37AP61513 92 aaKnown RBP11.78□□□□□ -0.52
PSPC1-202ENST00000427943 ADIRFQ15847 76 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 TMEM241Q24JQ0 296 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 HIGD2BQ4VC39 106 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 NUP35Q8NFH5 326 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
PSPC1-202ENST00000427943 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
PSPC1-202ENST00000427943 KRTAP29-1A8MX34 341 aaPredicted RBP11.77□□□□□ -0.53
PSPC1-202ENST00000427943 CHTF8P0CG12 524 aa11.77□□□□□ -0.53
PSPC1-202ENST00000427943 ESDP10768 282 aa11.77□□□□□ -0.53
PSPC1-202ENST00000427943 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
PSPC1-202ENST00000427943 SRSF3P84103 164 aaKnown RBP11.77□□□□□ -0.53
PSPC1-202ENST00000427943 RIGQ13278 110 aa11.77□□□□□ -0.53
PSPC1-202ENST00000427943 BTF3L4Q96K17 158 aa11.77□□□□□ -0.53
PSPC1-202ENST00000427943 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
PSPC1-202ENST00000427943 FAM74A3Q4VXF1 159 aa11.76□□□□□ -0.53
PSPC1-202ENST00000427943 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
PSPC1-202ENST00000427943 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
PSPC1-202ENST00000427943 CIRBPQ14011 172 aaKnown RBP11.75□□□□□ -0.53
PSPC1-202ENST00000427943 CFAP161Q6P656 301 aa11.75□□□□□ -0.53
PSPC1-202ENST00000427943 NAT8Q9UHE5 227 aa11.75□□□□□ -0.53
PSPC1-202ENST00000427943 TRBV27A0A0K0K1C4 114 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms