RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 CFHR3Q02985 330 aa10.95□□□□□ -0.66
CNTN4-206ENST00000427741 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
CNTN4-206ENST00000427741 CD28P10747 220 aa10.95□□□□□ -0.66
CNTN4-206ENST00000427741 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
CNTN4-206ENST00000427741 IGF2RP11717 2491 aa10.95□□□□□ -0.66
CNTN4-206ENST00000427741 Q6Q795 121 aa10.94□□□□□ -0.66
CNTN4-206ENST00000427741 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
CNTN4-206ENST00000427741 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
CNTN4-206ENST00000427741 NACAE9PAV3 2078 aa10.94□□□□□ -0.66
CNTN4-206ENST00000427741 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 HTN1P15515 57 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 PROK1P58294 105 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 CSMD2Q7Z408 3487 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 NBL1P41271 181 aa10.93□□□□□ -0.66
CNTN4-206ENST00000427741 MIAQ16674 131 aa10.92□□□□□ -0.66
CNTN4-206ENST00000427741 IGHV4-61A0A0C4DH41 118 aa10.92□□□□□ -0.66
CNTN4-206ENST00000427741 SNRPD3P62318 126 aaKnown RBP10.92□□□□□ -0.66
CNTN4-206ENST00000427741 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
CNTN4-206ENST00000427741 HIVEP3Q5T1R4 2406 aa10.92□□□□□ -0.66
CNTN4-206ENST00000427741 K7EQG2 157 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 CSPG4Q6UVK1 2322 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 Q9UF83 564 aa10.91□□□□□ -0.66
CNTN4-206ENST00000427741 H3BT86 120 aa10.9□□□□□ -0.66
CNTN4-206ENST00000427741 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
CNTN4-206ENST00000427741 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
CNTN4-206ENST00000427741 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
CNTN4-206ENST00000427741 CFAP161Q6P656 301 aa10.9□□□□□ -0.66
CNTN4-206ENST00000427741 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.67
CNTN4-206ENST00000427741 TMEM61Q8N0U2 210 aa10.9□□□□□ -0.67
CNTN4-206ENST00000427741 EDA2RQ9HAV5 297 aa10.9□□□□□ -0.67
CNTN4-206ENST00000427741 LST1O00453 97 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 CELSR2Q9HCU4 2923 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 COX6CP09669 75 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 PSMB8P28062 276 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
CNTN4-206ENST00000427741 PRM2P04554 102 aa10.88□□□□□ -0.67
CNTN4-206ENST00000427741 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
CNTN4-206ENST00000427741 C19orf84I3L1E1 186 aa10.88□□□□□ -0.67
CNTN4-206ENST00000427741 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
CNTN4-206ENST00000427741 UBE2D4Q9Y2X8 147 aa10.87□□□□□ -0.67
CNTN4-206ENST00000427741 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
CNTN4-206ENST00000427741 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
CNTN4-206ENST00000427741 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
CNTN4-206ENST00000427741 C2CD3Q4AC94 2353 aa10.86□□□□□ -0.67
CNTN4-206ENST00000427741 Q6ZSN1 163 aa10.86□□□□□ -0.67
CNTN4-206ENST00000427741 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
CNTN4-206ENST00000427741 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
CNTN4-206ENST00000427741 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
CNTN4-206ENST00000427741 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
CNTN4-206ENST00000427741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.85□□□□□ -0.67
CNTN4-206ENST00000427741 FAM240AA0A1B0GVK7 77 aa10.85□□□□□ -0.67
CNTN4-206ENST00000427741 IGKV2-29A2NJV5 120 aaPredicted RBP10.85□□□□□ -0.67
CNTN4-206ENST00000427741 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
CNTN4-206ENST00000427741 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
CNTN4-206ENST00000427741 PIMREGQ9BSJ6 248 aa10.84□□□□□ -0.67
CNTN4-206ENST00000427741 PPDPFQ9H3Y8 114 aa10.84□□□□□ -0.67
CNTN4-206ENST00000427741 YAE1D1Q9NRH1 226 aa10.84□□□□□ -0.67
CNTN4-206ENST00000427741 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
CNTN4-206ENST00000427741 CITED2Q99967 270 aaPredicted RBP10.84□□□□□ -0.67
CNTN4-206ENST00000427741 TIMM17BO60830 172 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 LINC00467Q9BRT7 94 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 IGHV3-38A0A0C4DH36 116 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 AVPP01185 164 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 LINC01587Q99440 93 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 CDKN2A-AS1Q9UH64 79 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.83□□□□□ -0.68
CNTN4-206ENST00000427741 C10orf105Q8TEF2 133 aa10.83□□□□□ -0.68
CNTN4-206ENST00000427741 SMCR5Q8TEV8 140 aa10.82□□□□□ -0.68
CNTN4-206ENST00000427741 NDUFA1O15239 70 aa10.81□□□□□ -0.68
CNTN4-206ENST00000427741 UCNP55089 124 aa10.81□□□□□ -0.68
CNTN4-206ENST00000427741 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
CNTN4-206ENST00000427741 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
CNTN4-206ENST00000427741 TRBV7-7A0A0K0K1E9 115 aa10.8□□□□□ -0.68
CNTN4-206ENST00000427741 MSMBP08118 114 aa10.8□□□□□ -0.68
CNTN4-206ENST00000427741 KLK5Q9Y337 293 aaPredicted RBP10.8□□□□□ -0.68
CNTN4-206ENST00000427741 IGHV4-59P01825 116 aa10.79□□□□□ -0.68
CNTN4-206ENST00000427741 IGLV5-45A0A087WSX0 123 aa10.79□□□□□ -0.68
CNTN4-206ENST00000427741 COX6A2Q02221 97 aa10.79□□□□□ -0.68
CNTN4-206ENST00000427741 VPREB3Q9UKI3 123 aa10.79□□□□□ -0.68
CNTN4-206ENST00000427741 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
CNTN4-206ENST00000427741 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
CNTN4-206ENST00000427741 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
CNTN4-206ENST00000427741 Q8N2B8 174 aa10.78□□□□□ -0.68
CNTN4-206ENST00000427741 LINC00308Q8TCZ7 52 aa10.78□□□□□ -0.68
CNTN4-206ENST00000427741 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
CNTN4-206ENST00000427741 TIRAPP58753 221 aa10.78□□□□□ -0.68
CNTN4-206ENST00000427741 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.68
CNTN4-206ENST00000427741 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.69
CNTN4-206ENST00000427741 RS1O15537 224 aa10.77□□□□□ -0.69
CNTN4-206ENST00000427741 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CNTN4-206ENST00000427741 DEFB131AP59861 70 aa10.76□□□□□ -0.69
CNTN4-206ENST00000427741 Q9H8V8 135 aa10.76□□□□□ -0.69
CNTN4-206ENST00000427741 ITPR1Q14643 2758 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms