RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 UNC79Q9P2D8 2635 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 SPANXB1Q9NS25 103 aaPredicted RBP8.06□□□□□ -1.12
TCOF1-204ENST00000427724 GNRH2O43555 120 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 RMI2Q96E14 147 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 SPXQ9BT56 116 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 IFITM1P13164 125 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
TCOF1-204ENST00000427724 Q6ZQT7 251 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 CCDC140Q96MF4 163 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 WFDC10AQ9H1F0 79 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 F8VRH5 84 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 FGF6P10767 208 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 GYPEP15421 78 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 NTN5Q8WTR8 489 aaPredicted RBP8.05□□□□□ -1.12
TCOF1-204ENST00000427724 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 SLC25A20O43772 301 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 EBI3Q14213 229 aa8.05□□□□□ -1.12
TCOF1-204ENST00000427724 TAL2Q16559 108 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 C2orf66Q6UXQ4 117 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 LY6LH3BQJ8 138 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 C6orf226Q5I0X4 101 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 WI2-2373I1.2A0A1W2PRP0 233 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 VCYO14598 125 aa8.04□□□□□ -1.12
TCOF1-204ENST00000427724 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 SS18Q15532 418 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 DEFB131BA0A096LNP1 70 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 ZNF80P51504 273 aaPredicted RBP8.03□□□□□ -1.12
TCOF1-204ENST00000427724 RHOHQ15669 191 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 MRPL53Q96EL3 112 aaKnown RBP8.03□□□□□ -1.12
TCOF1-204ENST00000427724 ODF1Q14990 250 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 UFSP1Q6NVU6 142 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 C16orf74Q96GX8 76 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 ICOSQ9Y6W8 199 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 PSMB8P28062 276 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 CRIP1P50238 77 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 HIGD1BQ9P298 99 aa8.03□□□□□ -1.12
TCOF1-204ENST00000427724 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.12
TCOF1-204ENST00000427724 M0R2P5 195 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 ATXN8Q156A1 80 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 C15orf53Q8NAA6 179 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 TRAV8-3A0A0A6YYJ7 113 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 HERV-K104P63124 156 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 TEN1Q86WV5 123 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 PRO1854Q9UHT4 67 aa8.02□□□□□ -1.13
TCOF1-204ENST00000427724 CRYGBP07316 175 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 Q6ZUT4 128 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 TNRC6BQ9UPQ9 1833 aaKnown RBP8.01□□□□□ -1.13
TCOF1-204ENST00000427724 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 M0R2N4 97 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 IGLV2-11P01706 119 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 TP53TG1Q9Y2A0 90 aa8.01□□□□□ -1.13
TCOF1-204ENST00000427724 E9PLD3 99 aa8□□□□□ -1.13
TCOF1-204ENST00000427724 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
TCOF1-204ENST00000427724 TMEM243Q9BU79 118 aa8□□□□□ -1.13
TCOF1-204ENST00000427724 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
TCOF1-204ENST00000427724 ANKRD29Q8N6D5 301 aa8□□□□□ -1.13
TCOF1-204ENST00000427724 LINC00158P58513 81 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 EDA2RQ9HAV5 297 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
TCOF1-204ENST00000427724 DNAL4O96015 105 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 ATP6V0E2Q8NHE4 81 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 TRBV6-1A0A0K0K1D8 114 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 TRPT1Q86TN4 253 aaKnown RBP7.99□□□□□ -1.13
TCOF1-204ENST00000427724 PCSK5Q92824 1860 aa7.99□□□□□ -1.13
TCOF1-204ENST00000427724 ZFP2Q6ZN57 461 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 RPL39LQ96EH5 51 aaKnown RBP7.98□□□□□ -1.13
TCOF1-204ENST00000427724 HHLA3Q9XRX5 114 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 AGRNO00468 2067 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 KALRNO60229 2985 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 A0A0J9YX75 114 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 LGALS9O00182 355 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 MAPKAPK5-AS1Q8N8E1 139 aa7.98□□□□□ -1.13
TCOF1-204ENST00000427724 PROK1P58294 105 aa7.97□□□□□ -1.13
TCOF1-204ENST00000427724 PMVKQ15126 192 aa7.97□□□□□ -1.13
TCOF1-204ENST00000427724 Q8N1Y9 231 aa7.96□□□□□ -1.13
TCOF1-204ENST00000427724 RETNQ9HD89 108 aa7.96□□□□□ -1.13
TCOF1-204ENST00000427724 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
TCOF1-204ENST00000427724 K7EQG2 157 aa7.96□□□□□ -1.14
TCOF1-204ENST00000427724 Q8N6K4 173 aa7.96□□□□□ -1.14
TCOF1-204ENST00000427724 TM2D2Q9BX73 214 aa7.96□□□□□ -1.14
TCOF1-204ENST00000427724 RBAKDNA6NC62 111 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 ZNF625Q96I27 306 aaPredicted RBP7.95□□□□□ -1.14
TCOF1-204ENST00000427724 XGP55808 180 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 J3QQQ9 107 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 BRI3O95415 125 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 IGLC6P0CF74 106 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
TCOF1-204ENST00000427724 CFC1P0CG37 223 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms