RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 IGLL5B9A064 214 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 M0R2P5 195 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 UBE2D1P51668 147 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 ZNF415Q09FC8 603 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 ZNF56Q15929 161 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 SPINK13Q1W4C9 94 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 C12orf74Q32Q52 190 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 MORN3Q6PF18 240 aaPredicted RBP3.81□□□□□ -1.8
ZNF440-203ENST00000427505 NRGNQ92686 78 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 TTTY13Q9BZ97 58 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
ZNF440-203ENST00000427505 IGSF10Q6WRI0 2623 aa3.81□□□□□ -1.8
ZNF440-203ENST00000427505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.81□□□□□ -1.82e-13■■■■□ 21.7
ZNF440-203ENST00000427505 ZNF815PA8K554 130 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 F8W1H4 67 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 IGKV3-20P01619 116 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 CMC4P56277 68 aaPredicted RBP3.8□□□□□ -1.8
ZNF440-203ENST00000427505 RRN3P1Q2M238 152 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 LYRM7Q5U5X0 104 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 AMELXQ99217 191 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 JPT2Q9H910 190 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 SPANXA1Q9NS26 97 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 LRBAP50851 2863 aa3.8□□□□□ -1.8
ZNF440-203ENST00000427505 UBR5O95071 2799 aaPredicted RBP3.8□□□□□ -1.8
ZNF440-203ENST00000427505 PRRC2AP48634 2157 aaKnown RBP3.79□□□□□ -1.8
ZNF440-203ENST00000427505 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 A0A0J9YY99 117 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 LEPROTO15243 131 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 INSP01308 110 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 IGHV3-53P01767 116 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1A1P0DJD3 496 aaKnown RBP3.79□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1CP0DJD4 496 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 P0DMU3 169 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 FAM231AP0DMU4 169 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 FAM231CP0DMU5 169 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 TCTAP57738 103 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 DEFB131AP59861 70 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 MRPS36P82909 103 aaKnown RBP3.79□□□□□ -1.8
ZNF440-203ENST00000427505 SCGB2A2Q13296 93 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1FQ15415 496 aaKnown RBP3.79□□□□□ -1.8
ZNF440-203ENST00000427505 DEFB114Q30KQ6 69 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 TMEM61Q8N0U2 210 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 SLC25A29Q8N8R3 303 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 C11orf72Q8NBR9 251 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 ZNRF2Q8NHG8 242 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 RAB37Q96AX2 223 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 PLEKHB2Q96CS7 222 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 AKAP6Q13023 2319 aa3.79□□□□□ -1.8
ZNF440-203ENST00000427505 MED13LQ71F56 2210 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
ZNF440-203ENST00000427505 G3V4G9 280 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 J3QQQ9 107 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 K7ERJ3 54 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 M0QXV9 152 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 RS1O15537 224 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 CIDEAO60543 219 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
ZNF440-203ENST00000427505 SEC61BP60468 96 aaKnown RBP3.78□□□□□ -1.8
ZNF440-203ENST00000427505 UBE2D3P61077 147 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 UBE2D2P62837 147 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 RPL39P62891 51 aaKnown RBP3.78□□□□□ -1.8
ZNF440-203ENST00000427505 CFAP126Q5VTH2 177 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 SCGB1D4Q6XE38 83 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 DYNLRB2Q8TF09 96 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 C16orf95Q9H693 158 aa3.78□□□□□ -1.8
ZNF440-203ENST00000427505 FLNCQ14315 2725 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 IGLV5-45A0A087WSX0 123 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 TRBV10-1A0A0K0K1A3 114 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 TINCRA0A1B0GVN0 87 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 KNCNA6PVL3 124 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 TMEM238C9JI98 176 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 J3QR89 54 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 IGHV3-30P01768 117 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 IGHV3-30-5P0DP03 117 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 ZNF22P17026 224 aaPredicted RBP3.77□□□□□ -1.81
ZNF440-203ENST00000427505 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
ZNF440-203ENST00000427505 SMAGPQ0VAQ4 97 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 SRSF9Q13242 221 aaKnown RBP eCLIP3.77□□□□□ -1.81
ZNF440-203ENST00000427505 TMEM170BQ5T4T1 132 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 FAM19A3Q7Z5A8 133 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 MAPK1IP1LQ8NDC0 245 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 ATP6V0E2Q8NHE4 81 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 VCX2Q9H322 139 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 PRO0461Q9UI25 63 aa3.77□□□□□ -1.81
ZNF440-203ENST00000427505 CSDC2Q9Y534 153 aaKnown RBP3.77□□□□□ -1.81
ZNF440-203ENST00000427505 USP24Q9UPU5 2620 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms