RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 Q96MF0 132 aa9.9□□□□□ -0.83
USP42-203ENST00000426246 TMEM61Q8N0U2 210 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 TIMM21Q9BVV7 248 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 A0A0J9YY99 117 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 PPP1R17O96001 155 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 CKS1BP61024 79 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 MEIG1Q5JSS6 88 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
USP42-203ENST00000426246 PRO1854Q9UHT4 67 aa9.89□□□□□ -0.83
USP42-203ENST00000426246 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 SETXQ7Z333 2677 aaKnown RBP9.88□□□□□ -0.83
USP42-203ENST00000426246 A0A0J9YX75 114 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 SRSF2Q01130 221 aaKnown RBP9.88□□□□□ -0.83
USP42-203ENST00000426246 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 CFC1BP0CG36 223 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 CFC1P0CG37 223 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
USP42-203ENST00000426246 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
USP42-203ENST00000426246 SOCS3O14543 225 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 I3L3M4 83 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
USP42-203ENST00000426246 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 GAGE4Q13068 117 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 GAGE5Q13069 117 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 NFE4Q86UQ8 179 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 C3orf56Q8N813 242 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 WFDC11Q8NEX6 87 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 M0QY20 66 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 LENEPQ9Y5L5 61 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 FOXI1Q12951 378 aa9.86□□□□□ -0.83
USP42-203ENST00000426246 A0A096LPF7 62 aa9.85□□□□□ -0.83
USP42-203ENST00000426246 RS1O15537 224 aa9.85□□□□□ -0.83
USP42-203ENST00000426246 BRI3O95415 125 aa9.85□□□□□ -0.83
USP42-203ENST00000426246 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
USP42-203ENST00000426246 Q6ZSN1 163 aa9.85□□□□□ -0.83
USP42-203ENST00000426246 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
USP42-203ENST00000426246 IGIPA6NJ69 53 aa9.84□□□□□ -0.83
USP42-203ENST00000426246 SLC25A20O43772 301 aa9.84□□□□□ -0.83
USP42-203ENST00000426246 RBMY1A1P0DJD3 496 aaKnown RBP9.84□□□□□ -0.83
USP42-203ENST00000426246 RBMY1CP0DJD4 496 aa9.84□□□□□ -0.83
USP42-203ENST00000426246 RBMY1FQ15415 496 aaKnown RBP9.84□□□□□ -0.83
USP42-203ENST00000426246 CLUHP3Q96NS8 147 aa9.84□□□□□ -0.83
USP42-203ENST00000426246 TRGV2A0A075B6R0 118 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 LINC00315P59091 139 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 PAPPA-AS1Q5QFB9 102 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 Q6ZUT4 128 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 Q6YL49 198 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 TEP1Q99973 2627 aaKnown RBP9.83□□□□□ -0.84
USP42-203ENST00000426246 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 KLLNB2CW77 178 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 IGLV1-40P01703 118 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 ELANEP08246 267 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
USP42-203ENST00000426246 TAL2Q16559 108 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 STHQ8IWL8 128 aa9.83□□□□□ -0.84
USP42-203ENST00000426246 IGHV4-4A0A075B6R2 117 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 RHODO00212 210 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
USP42-203ENST00000426246 NSUN5P1Q3KNT7 163 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 IGLV4-3A0A075B6K6 122 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 PSMB8P28062 276 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
USP42-203ENST00000426246 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 K7EQG2 157 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 RNASE1P07998 156 aaKnown RBP9.81□□□□□ -0.84
USP42-203ENST00000426246 ESM1Q9NQ30 184 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 C1QTNF4Q9BXJ3 329 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 M0R2P5 195 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 GAGE7O76087 117 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 F8P00451 2351 aa9.81□□□□□ -0.84
USP42-203ENST00000426246 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 ATP6V0BQ99437 205 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 XGP55808 180 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 H3BUA1 57 aa9.8□□□□□ -0.84
USP42-203ENST00000426246 TTC32Q5I0X7 151 aa9.79□□□□□ -0.84
USP42-203ENST00000426246 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms