RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 NRACQ8N912 160 aa4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 LY6G6CO95867 125 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 NCR2O95944 276 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SLPIP03973 132 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 LELP1Q5T871 98 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 NTM-AS1Q6ZSK4 140 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DAZ4Q86SG3 579 aaKnown RBP4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 GNB1LQ9BYB4 327 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DAZ3Q9NR90 486 aaKnown RBP4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TGIF2-C20orf24A0A0A6YYL0 155 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 IGHV3-38A0A0C4DH36 116 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PRSS47A8MTI9 375 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PPBPP02775 128 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 CKS2P33552 79 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 COX19Q49B96 90 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 OR10J3Q5JRS4 329 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 CBLN2Q8IUK8 224 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TMEM70Q9BUB7 260 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SMCO4Q9NRQ5 59 aa4.81□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TRBV27A0A0K0K1C4 114 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SDHAF1A6NFY7 115 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 D6R8Y8 96 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PHOX2AO14813 284 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TNFRSF6BO95407 300 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PPP1R17O96001 155 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 HLA-DQA1P01909 254 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TMEM97Q5BJF2 176 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 Q6ZR54 194 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 WFDC10BQ8IUB3 73 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 UBE2DNLQ8IWF7 75 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 ORMDL3Q8N138 153 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 Q9H8V8 135 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 ST20Q9HBF5 79 aa4.8□□□□□ -1.64
CHCHD3P1-201ENST00000425516 IGLV2-18A0A075B6J9 118 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 COLCA2A8K830 154 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SIVA1O15304 175 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 ATP6V1G1O75348 118 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TSHBP01222 138 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 NPYP01303 97 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 APCSP02743 223 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 MT-ND6P03923 174 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DNAH10OSP0CZ25 163 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SUMO2P61956 95 aaKnown RBP4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 IQCJQ1A5X6 159 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PRELID3AQ96N28 172 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DNAH2Q9P225 4427 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 TRAV8-6A0A0B4J262 113 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 I3L3M4 83 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 VCYO14598 125 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SCO1O75880 301 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 ESDP10768 282 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 PMCHP20382 165 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 S100A1P23297 94 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 COTL1Q14019 142 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 LINC01556Q5JQF7 62 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 NIT1Q86X76 327 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DEFB104AQ8WTQ1 72 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 ALKBH7Q9BT30 221 aaPredicted RBP4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
CHCHD3P1-201ENST00000425516 DNAH17Q9UFH2 4485 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TRBV25-1A0A075B6N4 114 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGHV1-24A0A0C4DH33 117 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 FABP9Q0Z7S8 132 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 CHCHD7Q9BUK0 85 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 SMIM2Q9BVW6 85 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
CHCHD3P1-201ENST00000425516 DNAH10Q8IVF4 4471 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 K7EP13 123 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 M0R2N4 97 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 AMTP48728 403 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TMEM243Q9BU79 118 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
CHCHD3P1-201ENST00000425516 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 A0A1B0GUV1 79 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 LINC01546A6NGU7 62 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 H7C423 109 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TCAPO15273 167 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IFI27P40305 119 aaPredicted RBP4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 GAGE6Q13070 117 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 MPV17L2Q567V2 206 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 Q8N8P6 123 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 C20orf203Q8NBC4 194 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 KIR2DL4Q99706 377 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 MAP1LC3AQ9H492 121 aa4.75□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TRAV9-2A0A087WT02 112 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms