RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 NDUFA7O95182 113 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 PPP1R17O96001 155 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 CFAP126Q5VTH2 177 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 MTORP42345 2549 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 ZNF56Q15929 161 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.86
COL12A1-205ENST00000425443 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
COL12A1-205ENST00000425443 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 A0A087WW49 117 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 KLLNB2CW77 178 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-205ENST00000425443 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.87
COL12A1-205ENST00000425443 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 PRM2P04554 102 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-205ENST00000425443 RRN3P1Q2M238 152 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-205ENST00000425443 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
COL12A1-205ENST00000425443 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 TAL2Q16559 108 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
COL12A1-205ENST00000425443 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 ELANEP08246 267 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 IGHV4-31P0DP07 118 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 Q6YL49 198 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
COL12A1-205ENST00000425443 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
COL12A1-205ENST00000425443 ACANP16112 2415 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 A0A0J9YX75 114 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 SDHAF1A6NFY7 115 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 A0A096LNT2 108 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 TSPEAR-AS2P59090 65 aa9.62□□□□□ -0.87
COL12A1-205ENST00000425443 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 K7EQG2 157 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 UBE2E2Q96LR5 201 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 ANKRD29Q8N6D5 301 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 Q96MF0 132 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
COL12A1-205ENST00000425443 Q8N1Y9 231 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 SLURP1P55000 103 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
COL12A1-205ENST00000425443 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
COL12A1-205ENST00000425443 KNCNA6PVL3 124 aa9.59□□□□□ -0.87
COL12A1-205ENST00000425443 LINC01619G3V211 115 aa9.59□□□□□ -0.87
COL12A1-205ENST00000425443 NXPH4O95158 308 aa9.59□□□□□ -0.87
COL12A1-205ENST00000425443 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
COL12A1-205ENST00000425443 VCYO14598 125 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 POLR2KP53803 58 aaKnown RBP9.58□□□□□ -0.88
COL12A1-205ENST00000425443 LGALS9O00182 355 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 DEFB131AP59861 70 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 LYRM7Q5U5X0 104 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
COL12A1-205ENST00000425443 A8MWV9 139 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 P0DMU3 169 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
COL12A1-205ENST00000425443 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 SCGB1C2P0DMR2 95 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 UBE2D1P51668 147 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
COL12A1-205ENST00000425443 DYNLRB2Q8TF09 96 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 A0A0J9YY99 117 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 A0A1B0GX51 115 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 PROK1P58294 105 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 MALP21145 153 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 AMELXQ99217 191 aa9.56□□□□□ -0.88
COL12A1-205ENST00000425443 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-205ENST00000425443 PMVKQ15126 192 aa9.55□□□□□ -0.88
COL12A1-205ENST00000425443 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
COL12A1-205ENST00000425443 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
COL12A1-205ENST00000425443 C11orf44Q8N8P7 122 aa9.55□□□□□ -0.88
COL12A1-205ENST00000425443 AKAP9Q99996 3911 aa9.55□□□□□ -0.88
COL12A1-205ENST00000425443 CR1P17927 2039 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms