RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZNRF2Q8NHG8 242 aa18.86■□□□□ 0.61
LDB1-202ENST00000425280 IGHV3-38A0A0C4DH36 116 aa18.86■□□□□ 0.61
LDB1-202ENST00000425280 CIDEAO60543 219 aa18.85■□□□□ 0.61
LDB1-202ENST00000425280 IGHV4-30-4P0DP06 118 aa18.85■□□□□ 0.61
LDB1-202ENST00000425280 TRBV7-3A0A075B6L6 115 aa18.85■□□□□ 0.61
LDB1-202ENST00000425280 ZC2HC1BQ5TFG8 222 aa18.85■□□□□ 0.61
LDB1-202ENST00000425280 M0R143 59 aa18.84■□□□□ 0.61
LDB1-202ENST00000425280 CHCHD7Q9BUK0 85 aa18.84■□□□□ 0.61
LDB1-202ENST00000425280 KRTAP10-11P60412 298 aa18.83■□□□□ 0.61
LDB1-202ENST00000425280 PMVKQ15126 192 aa18.83■□□□□ 0.61
LDB1-202ENST00000425280 MRPL52Q86TS9 123 aaKnown RBP18.83■□□□□ 0.61
LDB1-202ENST00000425280 MRPS16Q9Y3D3 137 aaKnown RBP18.83■□□□□ 0.61
LDB1-202ENST00000425280 RPL36AP83881 106 aaKnown RBP18.83■□□□□ 0.6
LDB1-202ENST00000425280 LINC00612Q8N6U2 182 aa18.83■□□□□ 0.6
LDB1-202ENST00000425280 RPL36ALQ969Q0 106 aaKnown RBP18.83■□□□□ 0.6
LDB1-202ENST00000425280 CST9LQ9H4G1 147 aa18.83■□□□□ 0.6
LDB1-202ENST00000425280 STAB1Q9NY15 2570 aa18.83■□□□□ 0.6
LDB1-202ENST00000425280 COTL1Q14019 142 aa18.82■□□□□ 0.6
LDB1-202ENST00000425280 OPRPNQ99935 248 aaPredicted RBP18.82■□□□□ 0.6
LDB1-202ENST00000425280 FGF6P10767 208 aa18.81■□□□□ 0.6
LDB1-202ENST00000425280 DEFB130BP0DP73 79 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 DEFB130AP0DP74 79 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 OR11H2Q8NH07 326 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 TRGV4A0A0C4DH28 118 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 NMUP48645 174 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 FHL2Q14192 279 aa18.8■□□□□ 0.6
LDB1-202ENST00000425280 IGKV2D-26A0A0A0MRZ7 120 aa18.79■□□□□ 0.6
LDB1-202ENST00000425280 TRBV6-4A0A1B0GX49 114 aa18.79■□□□□ 0.6
LDB1-202ENST00000425280 PYGO1Q9Y3Y4 419 aa18.79■□□□□ 0.6
LDB1-202ENST00000425280 GAGE12JA6NER3 117 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 UBE2D3P61077 147 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 UBE2D2P62837 147 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 EGFEM1PQ0D2K5 195 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 GAGE1Q13065 139 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 GAGE4Q13068 117 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 GAGE5Q13069 117 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 GAGE13Q4V321 117 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 ZMAT5Q9UDW3 170 aaKnown RBP18.78■□□□□ 0.6
LDB1-202ENST00000425280 IGLV4-69A0A075B6H9 119 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 IGLV4-3A0A075B6K6 122 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 BOD1L2Q8IYS8 172 aa18.78■□□□□ 0.6
LDB1-202ENST00000425280 PCP2Q8IVA1 136 aa18.77■□□□□ 0.6
LDB1-202ENST00000425280 CMYA5Q8N3K9 4069 aa18.77■□□□□ 0.59
LDB1-202ENST00000425280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.76■□□□□ 0.59
LDB1-202ENST00000425280 IGKV2-29A2NJV5 120 aaPredicted RBP18.76■□□□□ 0.59
LDB1-202ENST00000425280 LBHQ53QV2 105 aaPredicted RBP18.76■□□□□ 0.59
LDB1-202ENST00000425280 DAZ4Q86SG3 579 aaKnown RBP18.76■□□□□ 0.59
LDB1-202ENST00000425280 FAM104AQ969W3 186 aa18.76■□□□□ 0.59
LDB1-202ENST00000425280 DAZ3Q9NR90 486 aaKnown RBP18.76■□□□□ 0.59
LDB1-202ENST00000425280 LOC100131303A0A0U1RQF7 123 aa18.75■□□□□ 0.59
LDB1-202ENST00000425280 C2orf88Q9BSF0 95 aa18.75■□□□□ 0.59
LDB1-202ENST00000425280 IGHV4-28A0A0C4DH34 117 aa18.75■□□□□ 0.59
LDB1-202ENST00000425280 CEMP1Q6PRD7 247 aaPredicted RBP18.75■□□□□ 0.59
LDB1-202ENST00000425280 NBEAL2Q6ZNJ1 2754 aa18.75■□□□□ 0.59
LDB1-202ENST00000425280 FAM222AQ5U5X8 452 aa18.74■□□□□ 0.59
LDB1-202ENST00000425280 C2orf91Q6ZV80 131 aa18.74■□□□□ 0.59
LDB1-202ENST00000425280 RNF183Q96D59 192 aa18.74■□□□□ 0.59
LDB1-202ENST00000425280 UBE2D4Q9Y2X8 147 aa18.74■□□□□ 0.59
LDB1-202ENST00000425280 MAST4O15021 2626 aa18.74■□□□□ 0.59
LDB1-202ENST00000425280 C11orf86A6NJI1 115 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 LYRM9A8MSI8 78 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 LURAP1LQ8IV03 231 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 DEFB4AO15263 64 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 DLEU1O43261 78 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 BATFQ16520 125 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 SPANXA1Q9NS26 97 aa18.73■□□□□ 0.59
LDB1-202ENST00000425280 Q8NAQ8 132 aa18.72■□□□□ 0.59
LDB1-202ENST00000425280 VCX2Q9H322 139 aa18.72■□□□□ 0.59
LDB1-202ENST00000425280 PAPPA-AS1Q5QFB9 102 aa18.72■□□□□ 0.59
LDB1-202ENST00000425280 NTM-AS1Q6ZSK4 140 aa18.72■□□□□ 0.59
LDB1-202ENST00000425280 NPSP0C0P6 89 aa18.71■□□□□ 0.59
LDB1-202ENST00000425280 MIFP14174 115 aa18.71■□□□□ 0.59
LDB1-202ENST00000425280 PRADC1Q9BSG0 188 aa18.7■□□□□ 0.58
LDB1-202ENST00000425280 TTTY13Q9BZ97 58 aa18.7■□□□□ 0.58
LDB1-202ENST00000425280 AMELXQ99217 191 aa18.7■□□□□ 0.58
LDB1-202ENST00000425280 HINT1P49773 126 aaPredicted RBP18.69■□□□□ 0.58
LDB1-202ENST00000425280 CRYBA4P53673 196 aa18.69■□□□□ 0.58
LDB1-202ENST00000425280 A8MZ25 164 aa18.67■□□□□ 0.58
LDB1-202ENST00000425280 NFE4Q86UQ8 179 aa18.67■□□□□ 0.58
LDB1-202ENST00000425280 G3V4G9 280 aa18.67■□□□□ 0.58
LDB1-202ENST00000425280 LINC00694P0DN24 101 aa18.67■□□□□ 0.58
LDB1-202ENST00000425280 GTSF1LQ9H1H1 148 aa18.66■□□□□ 0.58
LDB1-202ENST00000425280 COL6A5A8TX70 2615 aa18.66■□□□□ 0.58
LDB1-202ENST00000425280 MPV17L2Q567V2 206 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 RNASE13Q5GAN3 156 aaKnown RBP18.65■□□□□ 0.58
LDB1-202ENST00000425280 TIMM21Q9BVV7 248 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 PKD1L1Q8TDX9 2849 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 SIVA1O15304 175 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 Q6ZUT4 128 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 SBSPONQ8IVN8 264 aa18.65■□□□□ 0.58
LDB1-202ENST00000425280 TRAV8-6A0A0B4J262 113 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 E9PLD3 99 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 CHAC1Q9BUX1 264 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 TMEM97Q5BJF2 176 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 MAPKAPK5-AS1Q8N8E1 139 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 CELA1Q9UNI1 258 aa18.64■□□□□ 0.57
LDB1-202ENST00000425280 A0A0J9YXV3 536 aa18.63■□□□□ 0.57
LDB1-202ENST00000425280 TMEM170BQ5T4T1 132 aa18.62■□□□□ 0.57
LDB1-202ENST00000425280 MRPS36P82909 103 aaKnown RBP18.62■□□□□ 0.57
LDB1-202ENST00000425280 DAD1P61803 113 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms