RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 NAT8Q9UHE5 227 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 PHLDA3Q9Y5J5 127 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 A0A1B0GW15 77 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 LINC00862A6NCI5 91 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 ZNF705GA8MUZ8 300 aaPredicted RBP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 KRBOX1C9JBD0 128 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 F8W036 122 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 H3BNG1 76 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 H7C1H1 209 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 GATCO43716 136 aaKnown RBP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 SPINK4O60575 86 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 EIF3GO75821 320 aaKnown RBP eCLIP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 PPP1R17O96001 155 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 OR5AL1P0C617 328 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 TRGC1P0CF51 173 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 CHTF8P0CG12 524 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 EMP1P54849 157 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 FOXA3P55318 350 aaPredicted RBP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 TCL1AP56279 114 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 DEFB1P60022 68 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 BTN1A1Q13410 526 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 CENPWQ5EE01 88 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 SPANXN1Q5VSR9 72 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 ZFP2Q6ZN57 461 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 CAMK2N1Q7Z7J9 78 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 Q86TA4 180 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 ZFP82Q8N141 532 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 C6orf223Q8N319 242 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 Q8NAQ8 132 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 OR4C5Q8NGB2 326 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 Q8TAT8 98 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 MUC7Q8TAX7 377 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 TVP23CQ96ET8 276 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 RNF185Q96GF1 192 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 TPPP3Q9BW30 176 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 EDA2RQ9HAV5 297 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 NOP10Q9NPE3 64 aaKnown RBP2.32□□□□□ -2.04
HDAC9-209ENST00000425071 OSTCQ9NRP0 149 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 NAGKQ9UJ70 344 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
HDAC9-209ENST00000425071 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 DEFB131BA0A096LNP1 70 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TRGV1A0A0A0MS02 117 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV4A0A0B4J268 109 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TRGV4A0A0C4DH28 118 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TMEM218A2RU14 115 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 K7EP13 123 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 GNRH2O43555 120 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 SH2D1AO60880 128 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 ARMS2P0C7Q2 107 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 RBMY1A1P0DJD3 496 aaKnown RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 RBMY1CP0DJD4 496 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 S100PP25815 95 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 CRIP1P50238 77 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 LINC00315P59091 139 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 RBMY1FQ15415 496 aaKnown RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 MRPL23Q16540 153 aaKnown RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 COX19Q49B96 90 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 FAM222AQ5U5X8 452 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 KCNIP4Q6PIL6 250 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 CEMP1Q6PRD7 247 aaPredicted RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 FER1L6-AS1Q8NA97 138 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 OR2D3Q8NGH3 330 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TSKUQ8WUA8 353 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 ZC2HC1AQ96GY0 325 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 SFRP2Q96HF1 295 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 IMMP2LQ96T52 175 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 PRADC1Q9BSG0 188 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 SEC11CQ9BY50 192 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 RPP21Q9H633 154 aaKnown RBP2.31□□□□□ -2.04
HDAC9-209ENST00000425071 TMEM242Q9NWH2 141 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 PRO0255Q9UI72 69 aa2.31□□□□□ -2.04
HDAC9-209ENST00000425071 PRKDCP78527 4128 aaKnown RBP2.3□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV9-1A0A075B6T8 112 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 A0A087WWC5 75 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 TRBV10-1A0A0K0K1A3 114 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 A0A1B0GUT8 65 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 TRBV6-4A0A1B0GX49 114 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 C19orf71A6NCJ1 209 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 F5H768 121 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 M0R036 132 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 IGLV2-8P01709 118 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 TYMSP04818 313 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 SFTA3P0C7M3 94 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 P0DMU3 169 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 FAM231AP0DMU4 169 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 FAM231CP0DMU5 169 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 G0S2P27469 103 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 ZNF80P51504 273 aaPredicted RBP2.3□□□□□ -2.04
HDAC9-209ENST00000425071 CCL18P55774 89 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 RAB4BP61018 213 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 PKIAP61925 76 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 RPL23P62829 140 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms