RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
CMTM3-202ENST00000424011 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
CMTM3-202ENST00000424011 JPT2Q9H910 190 aa12.16□□□□□ -0.46
CMTM3-202ENST00000424011 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE7O76087 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 LINC00315P59091 139 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 GAGE4Q13068 117 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 PTH2Q96A98 100 aa12.15□□□□□ -0.46
CMTM3-202ENST00000424011 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.47
CMTM3-202ENST00000424011 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
CMTM3-202ENST00000424011 RHODO00212 210 aa12.14□□□□□ -0.47
CMTM3-202ENST00000424011 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
CMTM3-202ENST00000424011 F8P00451 2351 aa12.14□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1BA6NDE4 496 aaKnown RBP12.14□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1EA6NEQ0 496 aaKnown RBP12.14□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1DP0C7P1 496 aaKnown RBP12.14□□□□□ -0.47
CMTM3-202ENST00000424011 PSMB2P49721 201 aa12.14□□□□□ -0.47
CMTM3-202ENST00000424011 NSUN5P1Q3KNT7 163 aa12.13□□□□□ -0.47
CMTM3-202ENST00000424011 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
CMTM3-202ENST00000424011 STHQ8IWL8 128 aa12.13□□□□□ -0.47
CMTM3-202ENST00000424011 ADARB2-AS1A8MUL3 147 aa12.12□□□□□ -0.47
CMTM3-202ENST00000424011 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
CMTM3-202ENST00000424011 ORMDL2Q53FV1 153 aa12.12□□□□□ -0.47
CMTM3-202ENST00000424011 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
CMTM3-202ENST00000424011 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
CMTM3-202ENST00000424011 INSP01308 110 aa12.12□□□□□ -0.47
CMTM3-202ENST00000424011 MRPL35Q9NZE8 188 aaKnown RBP12.12□□□□□ -0.47
CMTM3-202ENST00000424011 A0A087WWL8 130 aa12.11□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1A1P0DJD3 496 aaKnown RBP12.11□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1CP0DJD4 496 aa12.11□□□□□ -0.47
CMTM3-202ENST00000424011 RBMY1FQ15415 496 aaKnown RBP12.11□□□□□ -0.47
CMTM3-202ENST00000424011 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
CMTM3-202ENST00000424011 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
CMTM3-202ENST00000424011 SETD2Q9BYW2 2564 aaPredicted RBP12.11□□□□□ -0.47
CMTM3-202ENST00000424011 F5H697 171 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 IGLV1-51P01701 117 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 UBE2D3P61077 147 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 UBE2D2P62837 147 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 LYRM7Q5U5X0 104 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 KIR2DL4Q99706 377 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 SORL1Q92673 2214 aa12.1□□□□□ -0.47
CMTM3-202ENST00000424011 A0A087WX48 190 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 LOC107984156A0A0G2JMH3 177 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 HTN1P15515 57 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 ARL17AQ8IVW1 177 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 A8MWV9 139 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 TOMM6Q96B49 74 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 LINC01587Q99440 93 aa12.09□□□□□ -0.47
CMTM3-202ENST00000424011 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
CMTM3-202ENST00000424011 TRPT1Q86TN4 253 aaKnown RBP12.08□□□□□ -0.48
CMTM3-202ENST00000424011 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
CMTM3-202ENST00000424011 CRYGDP07320 174 aa12.08□□□□□ -0.48
CMTM3-202ENST00000424011 PLNP26678 52 aa12.08□□□□□ -0.48
CMTM3-202ENST00000424011 PF4P02776 101 aa12.07□□□□□ -0.48
CMTM3-202ENST00000424011 IFITM1P13164 125 aa12.07□□□□□ -0.48
CMTM3-202ENST00000424011 ZNF56Q15929 161 aa12.07□□□□□ -0.48
CMTM3-202ENST00000424011 C2CD3Q4AC94 2353 aa12.07□□□□□ -0.48
CMTM3-202ENST00000424011 TRBV20-1A0A075B6N2 111 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 M0R2P5 195 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 UBE2D1P51668 147 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 ANKRD29Q8N6D5 301 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 SCGB3A1Q96QR1 104 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 VCYO14598 125 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 SNCGO76070 127 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 C2orf66Q6UXQ4 117 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 SPXQ9BT56 116 aa12.06□□□□□ -0.48
CMTM3-202ENST00000424011 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
CMTM3-202ENST00000424011 KRTAP10-3P60369 221 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 Q6Q795 121 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 TCL1BO95988 128 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 BEAN1Q3B7T3 259 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
CMTM3-202ENST00000424011 NIPBLQ6KC79 2804 aaeCLIP12.05□□□□□ -0.48
CMTM3-202ENST00000424011 H7C1H1 209 aa12.04□□□□□ -0.48
CMTM3-202ENST00000424011 XCL2Q9UBD3 114 aa12.04□□□□□ -0.48
CMTM3-202ENST00000424011 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
CMTM3-202ENST00000424011 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
CMTM3-202ENST00000424011 M0QY20 66 aa12.04□□□□□ -0.48
CMTM3-202ENST00000424011 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
CMTM3-202ENST00000424011 EDA2RQ9HAV5 297 aa12.03□□□□□ -0.48
CMTM3-202ENST00000424011 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 PRM2P04554 102 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms