RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 HSPB8Q9UJY1 196 aa1.74□□□□□ -2.13
TRPS1-204ENST00000422939 CHCHD2Q9Y6H1 151 aaPredicted RBP1.74□□□□□ -2.13
TRPS1-204ENST00000422939 TNRC6BQ9UPQ9 1833 aaKnown RBP1.74□□□□□ -2.13
TRPS1-204ENST00000422939 NUP210Q8TEM1 1887 aaPredicted RBP1.73□□□□□ -2.13
TRPS1-204ENST00000422939 MDC1Q14676 2089 aaKnown RBP1.73□□□□□ -2.13
TRPS1-204ENST00000422939 SIPA1L3O60292 1781 aaPredicted RBP1.73□□□□□ -2.13
TRPS1-204ENST00000422939 B4DSR2 109 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 F8W1H4 67 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 UQCRQO14949 82 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 ZNF93P35789 620 aaPredicted RBP1.73□□□□□ -2.13
TRPS1-204ENST00000422939 HAGHLQ6PII5 290 aaPredicted RBP1.73□□□□□ -2.13
TRPS1-204ENST00000422939 TMEM14EPQ6UXP3 125 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 CLEC2BQ92478 149 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 CST11Q9H112 138 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 TAF9BQ9HBM6 251 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 MUC4Q99102 2169 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 ESPL1Q14674 2120 aa1.73□□□□□ -2.13
TRPS1-204ENST00000422939 SCN8AQ9UQD0 1980 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 DOCK1Q14185 1865 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 IGKV2-29A2NJV5 120 aaPredicted RBP1.72□□□□□ -2.13
TRPS1-204ENST00000422939 CCL16O15467 120 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 SMIM24O75264 130 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 COX4I1P13073 169 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 COX7CP15954 63 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 DIAPH2-AS1Q14236 149 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 GLIPR1L1Q6UWM5 242 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 UNQ6190/PRO20217Q6UXQ8 127 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 OR10AG1Q8NH19 301 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 CCL4L1Q8NHW4 92 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 TCEAL4Q96EI5 215 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 PFDN5Q99471 154 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 NIT2Q9NQR4 276 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 LAMA4Q16363 1823 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 AKAP6Q13023 2319 aa1.72□□□□□ -2.13
TRPS1-204ENST00000422939 PKHD1P08F94 4074 aa1.71□□□□□ -2.13
TRPS1-204ENST00000422939 HSPG2P98160 4391 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 IGKV3-7A0A075B6H7 116 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 C9orf170A2RU37 121 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 H3BRM9 83 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 HCRTO43612 131 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 HBDP02042 147 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 HIST1H1BP16401 226 aaKnown RBP1.71□□□□□ -2.14
TRPS1-204ENST00000422939 ETV6P41212 452 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 FOXA3P55318 350 aaPredicted RBP1.71□□□□□ -2.14
TRPS1-204ENST00000422939 CNBPP62633 177 aaKnown RBP1.71□□□□□ -2.14
TRPS1-204ENST00000422939 NUMA1Q14980 2115 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 MPV17LQ2QL34 196 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 SMIM21Q3B7S5 101 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 CASC2Q6XLA1 102 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 DEFB119Q8N690 84 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 OR4S1Q8NGB4 309 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 PATE1Q8WXA2 126 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
TRPS1-204ENST00000422939 EML6Q6ZMW3 1958 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 C3orf85A0A1B0GTC6 90 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 PNMA8CA0A1B0GUJ8 204 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 J3QR89 54 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 MT-ND4LP03901 98 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 CCDC58Q4VC31 144 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 Q8TAT8 98 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 MRPL57Q9BQC6 102 aaKnown RBP1.7□□□□□ -2.14
TRPS1-204ENST00000422939 FAM107BQ9H098 131 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 BANF2Q9H503 90 aa1.7□□□□□ -2.14
TRPS1-204ENST00000422939 PAIP2BQ9ULR5 123 aaKnown RBP1.7□□□□□ -2.14
TRPS1-204ENST00000422939 MYO5AQ9Y4I1 1855 aaKnown RBP1.7□□□□□ -2.14
TRPS1-204ENST00000422939 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
TRPS1-204ENST00000422939 STAB2Q8WWQ8 2551 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 ABCA4P78363 2273 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 PI4KAP42356 2102 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 KNTC1P50748 2209 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 LCE6AA0A183 80 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 A0A1B0GW64 132 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 GEMIN2O14893 280 aaKnown RBP1.69□□□□□ -2.14
TRPS1-204ENST00000422939 BLCAPP62952 87 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 TMEM244Q5VVB8 128 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 MMGT1Q8N4V1 131 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 C15orf53Q8NAA6 179 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 TSC22D3Q99576 134 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 DNAH9Q9NYC9 4486 aa1.69□□□□□ -2.14
TRPS1-204ENST00000422939 MYH10P35580 1976 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
TRPS1-204ENST00000422939 TRBV6-7A0A0A0MS04 114 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 M0R2Z0 102 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 DNAL4O96015 105 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 TCRAP04437 139 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 SLC25A5P05141 298 aaKnown RBP1.68□□□□□ -2.14
TRPS1-204ENST00000422939 EVI2AP22794 236 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 CKS2P33552 79 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 PCBD1P61457 104 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 Q5XG85 94 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 SMIM3Q9BZL3 60 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 FKBP11Q9NYL4 201 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 TMEM14CQ9P0S9 112 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
TRPS1-204ENST00000422939 FAT2Q9NYQ8 4349 aa1.67□□□□□ -2.14
TRPS1-204ENST00000422939 STARD9Q9P2P6 4700 aa1.67□□□□□ -2.14
TRPS1-204ENST00000422939 IGLV3-32A0A0A0MS00 114 aa1.67□□□□□ -2.14
TRPS1-204ENST00000422939 INE1O15225 51 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms