RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 PNRC1Q12796 327 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-209ENST00000421517 ADIRFQ15847 76 aa9.79□□□□□ -0.84
FAM3A-209ENST00000421517 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
FAM3A-209ENST00000421517 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
FAM3A-209ENST00000421517 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 TRAV8-4A0A0B4J246 113 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 RAB4AP20338 218 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 CLLU1Q5K131 121 aa9.78□□□□□ -0.84
FAM3A-209ENST00000421517 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
FAM3A-209ENST00000421517 RNF185Q96GF1 192 aa9.77□□□□□ -0.85
FAM3A-209ENST00000421517 TMEM70Q9BUB7 260 aa9.77□□□□□ -0.85
FAM3A-209ENST00000421517 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 LINC00862A6NCI5 91 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 I3L3M4 83 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 PPP1R2P9O14990 202 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 AMTP48728 403 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 GAGE6Q13070 117 aa9.76□□□□□ -0.85
FAM3A-209ENST00000421517 TRBV27A0A0K0K1C4 114 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 UBE2L6O14933 153 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 S100A8P05109 93 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
FAM3A-209ENST00000421517 Q8N1X5 172 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
FAM3A-209ENST00000421517 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
FAM3A-209ENST00000421517 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-209ENST00000421517 REG3AQ06141 175 aa9.74□□□□□ -0.85
FAM3A-209ENST00000421517 ST20Q9HBF5 79 aa9.74□□□□□ -0.85
FAM3A-209ENST00000421517 DNAH8Q96JB1 4490 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 APCSP02743 223 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 KRTAP10-1P60331 282 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 WFDC2Q14508 124 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 FAM104BQ5XKR9 115 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 KRTAP26-1Q6PEX3 210 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 UQCC3Q6UW78 93 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 ATP5L2Q7Z4Y8 100 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
FAM3A-209ENST00000421517 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
FAM3A-209ENST00000421517 F8W036 122 aa9.72□□□□□ -0.85
FAM3A-209ENST00000421517 ESDP10768 282 aa9.72□□□□□ -0.85
FAM3A-209ENST00000421517 PMCHP20382 165 aa9.72□□□□□ -0.85
FAM3A-209ENST00000421517 XGP55808 180 aa9.72□□□□□ -0.85
FAM3A-209ENST00000421517 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
FAM3A-209ENST00000421517 PCLOQ9Y6V0 5065 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 A0A1B0GXF2 115 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 VCYO14598 125 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 TCAPO15273 167 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 HBBP68871 147 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 C20orf78Q9BR46 151 aa9.71□□□□□ -0.86
FAM3A-209ENST00000421517 PHOX2AO14813 284 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 PPBPP02775 128 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
FAM3A-209ENST00000421517 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 Q6ZSA8 131 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
FAM3A-209ENST00000421517 NRACQ8N912 160 aa9.7□□□□□ -0.86
FAM3A-209ENST00000421517 TSHBP01222 138 aa9.69□□□□□ -0.86
FAM3A-209ENST00000421517 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
FAM3A-209ENST00000421517 CSDC2Q9Y534 153 aaKnown RBP9.69□□□□□ -0.86
FAM3A-209ENST00000421517 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
FAM3A-209ENST00000421517 FUSP35637 526 aaKnown RBP eCLIP9.68□□□□□ -0.86
FAM3A-209ENST00000421517 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
FAM3A-209ENST00000421517 IFITM2Q01629 132 aa9.68□□□□□ -0.86
FAM3A-209ENST00000421517 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
FAM3A-209ENST00000421517 AMMECR1LQ6DCA0 310 aa9.68□□□□□ -0.86
FAM3A-209ENST00000421517 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
FAM3A-209ENST00000421517 LECT2O14960 151 aa9.67□□□□□ -0.86
FAM3A-209ENST00000421517 FGF6P10767 208 aa9.67□□□□□ -0.86
FAM3A-209ENST00000421517 CAMPP49913 170 aa9.67□□□□□ -0.86
FAM3A-209ENST00000421517 BTF3L4Q96K17 158 aa9.67□□□□□ -0.86
FAM3A-209ENST00000421517 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
FAM3A-209ENST00000421517 C7orf77A4D0Y5 90 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 CCL25O15444 150 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 CKS2P33552 79 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
FAM3A-209ENST00000421517 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.65□□□□□ -0.86
FAM3A-209ENST00000421517 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
FAM3A-209ENST00000421517 TMEM18Q96B42 140 aa9.65□□□□□ -0.86
FAM3A-209ENST00000421517 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.86
FAM3A-209ENST00000421517 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
FAM3A-209ENST00000421517 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.86
FAM3A-209ENST00000421517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-209ENST00000421517 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-209ENST00000421517 TMEM218A2RU14 115 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 PRSS47A8MTI9 375 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
FAM3A-209ENST00000421517 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
FAM3A-209ENST00000421517 CFAP161Q6P656 301 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 SEC11CQ9BY50 192 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms