RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 NBASA2RRP1 2371 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 IGF1P05019 195 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 CCL18P55774 89 aa9.31□□□□□ -0.92
CLCN4-203ENST00000421085 INSL3P51460 131 aa9.31□□□□□ -0.92
CLCN4-203ENST00000421085 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
CLCN4-203ENST00000421085 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
CLCN4-203ENST00000421085 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
CLCN4-203ENST00000421085 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
CLCN4-203ENST00000421085 GPR179Q6PRD1 2367 aa9.3□□□□□ -0.92
CLCN4-203ENST00000421085 SERP2Q8N6R1 65 aa9.3□□□□□ -0.92
CLCN4-203ENST00000421085 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
CLCN4-203ENST00000421085 C20orf173Q96LM9 149 aa9.3□□□□□ -0.92
CLCN4-203ENST00000421085 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
CLCN4-203ENST00000421085 DEFB135Q30KP9 77 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 SNURFQ9Y675 71 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 MAP6D1Q9H9H5 199 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 SEC61GP60059 68 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
CLCN4-203ENST00000421085 PRO0255Q9UI72 69 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 PLCE1Q9P212 2302 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 LINC00269Q8N2A0 174 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 Q6ZTI0 123 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 UFSP1Q6NVU6 142 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 LINC00574Q9H8X3 128 aa9.28□□□□□ -0.92
CLCN4-203ENST00000421085 TMEM89A2RUT3 159 aa9.27□□□□□ -0.93
CLCN4-203ENST00000421085 MYCNOSP40205 109 aa9.27□□□□□ -0.93
CLCN4-203ENST00000421085 SPRY4Q9C004 299 aa9.27□□□□□ -0.93
CLCN4-203ENST00000421085 A8MZ25 164 aa9.27□□□□□ -0.93
CLCN4-203ENST00000421085 COX7CP15954 63 aa9.27□□□□□ -0.93
CLCN4-203ENST00000421085 RIF1Q5UIP0 2472 aaKnown RBP9.27□□□□□ -0.93
CLCN4-203ENST00000421085 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 M0QY20 66 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 NUP210Q8TEM1 1887 aaPredicted RBP9.26□□□□□ -0.93
CLCN4-203ENST00000421085 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 WISP2O76076 250 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 REG3AQ06141 175 aa9.26□□□□□ -0.93
CLCN4-203ENST00000421085 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
CLCN4-203ENST00000421085 A6NDX4 124 aa9.25□□□□□ -0.93
CLCN4-203ENST00000421085 LST1O00453 97 aa9.25□□□□□ -0.93
CLCN4-203ENST00000421085 DEFB113Q30KQ7 82 aa9.25□□□□□ -0.93
CLCN4-203ENST00000421085 ADORA2A-AS1P86434 159 aa9.24□□□□□ -0.93
CLCN4-203ENST00000421085 Q6ZS46 218 aa9.24□□□□□ -0.93
CLCN4-203ENST00000421085 NRACQ8N912 160 aa9.24□□□□□ -0.93
CLCN4-203ENST00000421085 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-203ENST00000421085 ODF3BA8MYP8 253 aa9.24□□□□□ -0.93
CLCN4-203ENST00000421085 NRGNQ92686 78 aa9.24□□□□□ -0.93
CLCN4-203ENST00000421085 H7C423 109 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 NDUFC1O43677 76 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-203ENST00000421085 PROK1P58294 105 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 TIMM17BO60830 172 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 FREM1Q5H8C1 2179 aa9.23□□□□□ -0.93
CLCN4-203ENST00000421085 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 LINC00310P59036 64 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 Q8N976 141 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 M0QXV9 152 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 NCOA6Q14686 2063 aaPredicted RBP9.22□□□□□ -0.93
CLCN4-203ENST00000421085 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 DCANP1Q8TF63 244 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 B9D2Q9BPU9 175 aa9.22□□□□□ -0.93
CLCN4-203ENST00000421085 CCKP06307 115 aa9.21□□□□□ -0.93
CLCN4-203ENST00000421085 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.93
CLCN4-203ENST00000421085 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
CLCN4-203ENST00000421085 K7EQG2 157 aa9.21□□□□□ -0.94
CLCN4-203ENST00000421085 C3orf84H3BNL1 204 aa9.21□□□□□ -0.94
CLCN4-203ENST00000421085 TNCP24821 2201 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 A0A096LNI7 61 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 C1orf195Q5TG92 126 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 TSHBP01222 138 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
CLCN4-203ENST00000421085 A0A1W2PNU3 283 aaPredicted RBP9.19□□□□□ -0.94
CLCN4-203ENST00000421085 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
CLCN4-203ENST00000421085 KIF26AQ9ULI4 1882 aaPredicted RBP9.19□□□□□ -0.94
CLCN4-203ENST00000421085 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
CLCN4-203ENST00000421085 ALPK3Q96L96 1907 aa9.19□□□□□ -0.94
CLCN4-203ENST00000421085 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 Q6Q795 121 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 HRCT1Q6UXD1 115 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 PRR4Q16378 134 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
CLCN4-203ENST00000421085 ZNF106Q9H2Y7 1883 aaKnown RBP9.17□□□□□ -0.94
CLCN4-203ENST00000421085 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
CLCN4-203ENST00000421085 A0A0J9YWU9 116 aa9.17□□□□□ -0.94
CLCN4-203ENST00000421085 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms