RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 APCSP02743 223 aa13.73□□□□□ -0.21
EGFR-204ENST00000420316 AMTP48728 403 aa13.73□□□□□ -0.21
EGFR-204ENST00000420316 C1orf134Q5TEV5 83 aa13.73□□□□□ -0.21
EGFR-204ENST00000420316 YPEL4Q96NS1 127 aa13.73□□□□□ -0.21
EGFR-204ENST00000420316 SCO1O75880 301 aa13.72□□□□□ -0.21
EGFR-204ENST00000420316 TSHBP01222 138 aa13.72□□□□□ -0.21
EGFR-204ENST00000420316 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
EGFR-204ENST00000420316 GNB1LQ9BYB4 327 aa13.72□□□□□ -0.21
EGFR-204ENST00000420316 TRBV24-1A0A075B6N3 115 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 PPBPP02775 128 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 C6orf223Q8N319 242 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 C10orf126Q8N4M7 172 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 MRPL18Q9H0U6 180 aaKnown RBP13.71□□□□□ -0.21
EGFR-204ENST00000420316 SMCO4Q9NRQ5 59 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 FRAS1Q86XX4 4008 aa13.71□□□□□ -0.21
EGFR-204ENST00000420316 PPP1R17O96001 155 aa13.71□□□□□ -0.22
EGFR-204ENST00000420316 HLA-DQA1P01909 254 aa13.71□□□□□ -0.22
EGFR-204ENST00000420316 MPV17L2Q567V2 206 aa13.71□□□□□ -0.22
EGFR-204ENST00000420316 TMEM243Q9BU79 118 aa13.71□□□□□ -0.22
EGFR-204ENST00000420316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.7□□□□□ -0.22
EGFR-204ENST00000420316 TRBV27A0A0K0K1C4 114 aa13.7□□□□□ -0.22
EGFR-204ENST00000420316 IGKV2-29A2NJV5 120 aaPredicted RBP13.7□□□□□ -0.22
EGFR-204ENST00000420316 Q8N976 141 aa13.7□□□□□ -0.22
EGFR-204ENST00000420316 A0A087WX48 190 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 VCYO14598 125 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 RTL8CO15255 209 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 FABP9Q0Z7S8 132 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 CHCHD7Q9BUK0 85 aa13.69□□□□□ -0.22
EGFR-204ENST00000420316 LINC00336Q6ZUF6 198 aa13.68□□□□□ -0.22
EGFR-204ENST00000420316 SMIM2Q9BVW6 85 aa13.68□□□□□ -0.22
EGFR-204ENST00000420316 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
EGFR-204ENST00000420316 TCAPO15273 167 aa13.67□□□□□ -0.22
EGFR-204ENST00000420316 Q9HAA7 133 aa13.67□□□□□ -0.22
EGFR-204ENST00000420316 KLK12Q9UKR0 248 aa13.67□□□□□ -0.22
EGFR-204ENST00000420316 TRAPPC1Q9Y5R8 145 aa13.67□□□□□ -0.22
EGFR-204ENST00000420316 FCER1GP30273 86 aa13.66□□□□□ -0.22
EGFR-204ENST00000420316 COX19Q49B96 90 aa13.66□□□□□ -0.22
EGFR-204ENST00000420316 PHOX2AO14813 284 aa13.66□□□□□ -0.22
EGFR-204ENST00000420316 UBE2L6O14933 153 aa13.66□□□□□ -0.22
EGFR-204ENST00000420316 RBX1P62877 108 aa13.66□□□□□ -0.22
EGFR-204ENST00000420316 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 MT-ND6P03923 174 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 PKIAP61925 76 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 KIR2DL4Q99706 377 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 FAT2Q9NYQ8 4349 aa13.65□□□□□ -0.22
EGFR-204ENST00000420316 IGLV4-60A0A075B6I1 120 aa13.64□□□□□ -0.23
EGFR-204ENST00000420316 ATP6V1G1O75348 118 aa13.64□□□□□ -0.23
EGFR-204ENST00000420316 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
EGFR-204ENST00000420316 ALKBH7Q9BT30 221 aaPredicted RBP13.64□□□□□ -0.23
EGFR-204ENST00000420316 ANGP03950 147 aaKnown RBP13.63□□□□□ -0.23
EGFR-204ENST00000420316 ESDP10768 282 aa13.63□□□□□ -0.23
EGFR-204ENST00000420316 NFE4Q86UQ8 179 aa13.63□□□□□ -0.23
EGFR-204ENST00000420316 RPL32P62910 135 aaKnown RBP13.62□□□□□ -0.23
EGFR-204ENST00000420316 LAGE3Q14657 143 aa13.62□□□□□ -0.23
EGFR-204ENST00000420316 LAMTOR2Q9Y2Q5 125 aa13.62□□□□□ -0.23
EGFR-204ENST00000420316 RNASEKQ6P5S7 137 aaKnown RBP13.62□□□□□ -0.23
EGFR-204ENST00000420316 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
EGFR-204ENST00000420316 C20orf203Q8NBC4 194 aa13.61□□□□□ -0.23
EGFR-204ENST00000420316 UBE2WQ96B02 151 aa13.61□□□□□ -0.23
EGFR-204ENST00000420316 PRSS29PA6NIE9 313 aa13.6□□□□□ -0.23
EGFR-204ENST00000420316 FGF6P10767 208 aa13.6□□□□□ -0.23
EGFR-204ENST00000420316 AMMECR1LQ6DCA0 310 aa13.6□□□□□ -0.23
EGFR-204ENST00000420316 Q6ZRN7 208 aaPredicted RBP13.6□□□□□ -0.23
EGFR-204ENST00000420316 COLCA2A8K830 154 aa13.59□□□□□ -0.23
EGFR-204ENST00000420316 PRSS47A8MTI9 375 aa13.59□□□□□ -0.23
EGFR-204ENST00000420316 RPL39P62891 51 aaKnown RBP13.59□□□□□ -0.23
EGFR-204ENST00000420316 LINC00269Q8N2A0 174 aa13.59□□□□□ -0.23
EGFR-204ENST00000420316 Q8N8P6 123 aa13.59□□□□□ -0.23
EGFR-204ENST00000420316 ENHOQ6UWT2 76 aa13.58□□□□□ -0.23
EGFR-204ENST00000420316 RAB5AP20339 215 aa13.58□□□□□ -0.24
EGFR-204ENST00000420316 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
EGFR-204ENST00000420316 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
EGFR-204ENST00000420316 TNP2Q05952 138 aa13.57□□□□□ -0.24
EGFR-204ENST00000420316 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
EGFR-204ENST00000420316 EPPK1P58107 5090 aaKnown RBP13.56□□□□□ -0.24
EGFR-204ENST00000420316 H7C423 109 aa13.55□□□□□ -0.24
EGFR-204ENST00000420316 CRPP02741 224 aa13.55□□□□□ -0.24
EGFR-204ENST00000420316 PRSS3P2Q8NHM4 247 aa13.55□□□□□ -0.24
EGFR-204ENST00000420316 TRGC2P03986 189 aa13.54□□□□□ -0.24
EGFR-204ENST00000420316 RNASE13Q5GAN3 156 aaKnown RBP13.54□□□□□ -0.24
EGFR-204ENST00000420316 NXT2Q9NPJ8 142 aaKnown RBP13.54□□□□□ -0.24
EGFR-204ENST00000420316 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
EGFR-204ENST00000420316 REG3AQ06141 175 aa13.54□□□□□ -0.24
EGFR-204ENST00000420316 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
EGFR-204ENST00000420316 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
EGFR-204ENST00000420316 HECTD4Q9Y4D8 3996 aa13.53□□□□□ -0.24
EGFR-204ENST00000420316 IGLV10-54A0A075B6I4 117 aa13.53□□□□□ -0.24
EGFR-204ENST00000420316 S100A1P23297 94 aa13.53□□□□□ -0.24
EGFR-204ENST00000420316 Q0VG73 95 aa13.53□□□□□ -0.24
EGFR-204ENST00000420316 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
EGFR-204ENST00000420316 OR5A1Q8NGJ0 315 aa13.52□□□□□ -0.25
EGFR-204ENST00000420316 OPRPNQ99935 248 aaPredicted RBP13.52□□□□□ -0.25
EGFR-204ENST00000420316 TM2D2Q9BX73 214 aa13.52□□□□□ -0.25
EGFR-204ENST00000420316 PRR34Q9NV39 138 aa13.52□□□□□ -0.25
EGFR-204ENST00000420316 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
EGFR-204ENST00000420316 PSCAO43653 123 aa13.51□□□□□ -0.25
EGFR-204ENST00000420316 DGAT2L7PQ6IED9 249 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms