RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 C9orf163Q8N9P6 203 aa13.19□□□□□ -0.3
MCF2L-212ENST00000420013 CLRN3Q8NCR9 226 aa13.19□□□□□ -0.3
MCF2L-212ENST00000420013 OCC1Q8TAD7 63 aa13.19□□□□□ -0.3
MCF2L-212ENST00000420013 TMEM243Q9BU79 118 aa13.19□□□□□ -0.3
MCF2L-212ENST00000420013 A0A1B0GUV1 79 aa13.18□□□□□ -0.3
MCF2L-212ENST00000420013 REG3AQ06141 175 aa13.18□□□□□ -0.3
MCF2L-212ENST00000420013 NIT2Q9NQR4 276 aa13.18□□□□□ -0.3
MCF2L-212ENST00000420013 UBE2L6O14933 153 aa13.17□□□□□ -0.3
MCF2L-212ENST00000420013 LYPD6BQ8NI32 183 aa13.17□□□□□ -0.3
MCF2L-212ENST00000420013 CNFNQ9BYD5 112 aa13.17□□□□□ -0.3
MCF2L-212ENST00000420013 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
MCF2L-212ENST00000420013 K7EN84 100 aa13.16□□□□□ -0.3
MCF2L-212ENST00000420013 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
MCF2L-212ENST00000420013 PKHD1L1Q86WI1 4243 aa13.16□□□□□ -0.3
MCF2L-212ENST00000420013 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.3
MCF2L-212ENST00000420013 COTL1Q14019 142 aa13.15□□□□□ -0.3
MCF2L-212ENST00000420013 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
MCF2L-212ENST00000420013 OXTP01178 125 aa13.14□□□□□ -0.31
MCF2L-212ENST00000420013 AMTP48728 403 aa13.14□□□□□ -0.31
MCF2L-212ENST00000420013 CNBPP62633 177 aaKnown RBP13.14□□□□□ -0.31
MCF2L-212ENST00000420013 FAT3Q8TDW7 4589 aa13.13□□□□□ -0.31
MCF2L-212ENST00000420013 RPL37AP61513 92 aaKnown RBP13.13□□□□□ -0.31
MCF2L-212ENST00000420013 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
MCF2L-212ENST00000420013 LRP1Q07954 4544 aaKnown RBP13.13□□□□□ -0.31
MCF2L-212ENST00000420013 IGLV10-54A0A075B6I4 117 aa13.12□□□□□ -0.31
MCF2L-212ENST00000420013 A8MWL6 223 aa13.12□□□□□ -0.31
MCF2L-212ENST00000420013 IGLV4-60A0A075B6I1 120 aa13.11□□□□□ -0.31
MCF2L-212ENST00000420013 TRAV26-2A0A0B4J265 109 aa13.11□□□□□ -0.31
MCF2L-212ENST00000420013 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-212ENST00000420013 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
MCF2L-212ENST00000420013 GTSF1Q8WW33 167 aa13.1□□□□□ -0.31
MCF2L-212ENST00000420013 SMIM7Q9BQ49 75 aa13.1□□□□□ -0.31
MCF2L-212ENST00000420013 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
MCF2L-212ENST00000420013 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
MCF2L-212ENST00000420013 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
MCF2L-212ENST00000420013 GATD1Q8NB37 220 aa13.09□□□□□ -0.31
MCF2L-212ENST00000420013 FAM210AQ96ND0 272 aa13.09□□□□□ -0.31
MCF2L-212ENST00000420013 NCR2O95944 276 aa13.08□□□□□ -0.32
MCF2L-212ENST00000420013 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
MCF2L-212ENST00000420013 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
MCF2L-212ENST00000420013 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
MCF2L-212ENST00000420013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-212ENST00000420013 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
MCF2L-212ENST00000420013 NDUFS6O75380 124 aaKnown RBP13.07□□□□□ -0.32
MCF2L-212ENST00000420013 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
MCF2L-212ENST00000420013 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
MCF2L-212ENST00000420013 RNF185Q96GF1 192 aa13.07□□□□□ -0.32
MCF2L-212ENST00000420013 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
MCF2L-212ENST00000420013 RPL39LQ96EH5 51 aaKnown RBP13.06□□□□□ -0.32
MCF2L-212ENST00000420013 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
MCF2L-212ENST00000420013 H7C423 109 aa13.05□□□□□ -0.32
MCF2L-212ENST00000420013 FOXA3P55318 350 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-212ENST00000420013 CT83Q5H943 113 aa13.05□□□□□ -0.32
MCF2L-212ENST00000420013 APCSP02743 223 aa13.04□□□□□ -0.32
MCF2L-212ENST00000420013 RNASEKQ6P5S7 137 aaKnown RBP13.04□□□□□ -0.32
MCF2L-212ENST00000420013 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
MCF2L-212ENST00000420013 PANO1I0J062 215 aa13.03□□□□□ -0.32
MCF2L-212ENST00000420013 PMCHP20382 165 aa13.03□□□□□ -0.32
MCF2L-212ENST00000420013 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
MCF2L-212ENST00000420013 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
MCF2L-212ENST00000420013 TSKUQ8WUA8 353 aa13.02□□□□□ -0.33
MCF2L-212ENST00000420013 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
MCF2L-212ENST00000420013 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
MCF2L-212ENST00000420013 SRP19P09132 144 aaKnown RBP13.01□□□□□ -0.33
MCF2L-212ENST00000420013 ZNF25P17030 456 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-212ENST00000420013 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
MCF2L-212ENST00000420013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
MCF2L-212ENST00000420013 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
MCF2L-212ENST00000420013 I3L3M4 83 aa13□□□□□ -0.33
MCF2L-212ENST00000420013 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
MCF2L-212ENST00000420013 BTF3L4Q96K17 158 aa13□□□□□ -0.33
MCF2L-212ENST00000420013 OSTCQ9NRP0 149 aa13□□□□□ -0.33
MCF2L-212ENST00000420013 TRBV6-5A0A0K0K1A5 114 aa12.99□□□□□ -0.33
MCF2L-212ENST00000420013 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
MCF2L-212ENST00000420013 ST20Q9HBF5 79 aa12.99□□□□□ -0.33
MCF2L-212ENST00000420013 SLPIP03973 132 aa12.98□□□□□ -0.33
MCF2L-212ENST00000420013 HNRNPA3P51991 378 aaKnown RBP12.98□□□□□ -0.33
MCF2L-212ENST00000420013 DPH3Q96FX2 82 aa12.98□□□□□ -0.33
MCF2L-212ENST00000420013 TMEM101Q96IK0 257 aa12.98□□□□□ -0.33
MCF2L-212ENST00000420013 HMCN2Q8NDA2 5059 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 FGF6P10767 208 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 RIGQ13278 110 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 PEA15Q15121 130 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 TMEM241Q24JQ0 296 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
MCF2L-212ENST00000420013 A0A087WYN8 130 aa12.96□□□□□ -0.33
MCF2L-212ENST00000420013 GVQW2A0A096LPI5 108 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-212ENST00000420013 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
MCF2L-212ENST00000420013 FAM74A3Q4VXF1 159 aa12.96□□□□□ -0.33
MCF2L-212ENST00000420013 CHCHD10Q8WYQ3 142 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-212ENST00000420013 PLAC8Q9NZF1 115 aa12.96□□□□□ -0.33
MCF2L-212ENST00000420013 PKIGQ9Y2B9 76 aa12.96□□□□□ -0.33
MCF2L-212ENST00000420013 ADIRFQ15847 76 aa12.95□□□□□ -0.34
MCF2L-212ENST00000420013 Q6ZRU5 148 aa12.95□□□□□ -0.34
MCF2L-212ENST00000420013 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
MCF2L-212ENST00000420013 MRAP2Q96G30 205 aa12.95□□□□□ -0.34
MCF2L-212ENST00000420013 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
MCF2L-212ENST00000420013 CHTF8P0CG12 524 aa12.94□□□□□ -0.34
MCF2L-212ENST00000420013 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms