RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 TRAV9-2A0A087WT02 112 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 IGLL1P15814 213 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 LAGE3Q14657 143 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 C1orf158Q8N1D5 194 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 OR13C6PQ8NH95 151 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 IFI27L1Q96BM0 104 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 C18orf15Q96N68 181 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 LINC00467Q9BRT7 94 aa5.91□□□□□ -1.46
COL12A1-204ENST00000419671 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.46
COL12A1-204ENST00000419671 RPL24P83731 157 aaKnown RBP5.9□□□□□ -1.46
COL12A1-204ENST00000419671 MORN3Q6PF18 240 aaPredicted RBP5.9□□□□□ -1.46
COL12A1-204ENST00000419671 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.9□□□□□ -1.46
COL12A1-204ENST00000419671 LINC01587Q99440 93 aa5.9□□□□□ -1.46
COL12A1-204ENST00000419671 NAA38Q9BRA0 125 aaKnown RBP5.9□□□□□ -1.46
COL12A1-204ENST00000419671 JMJD1CQ15652 2540 aa5.9□□□□□ -1.46
COL12A1-204ENST00000419671 F8P00451 2351 aa5.9□□□□□ -1.47
COL12A1-204ENST00000419671 hDV102S1A0JD36 115 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 F5H697 171 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 M0QY20 66 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 PPP1R17O96001 155 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 SPINK8P0C7L1 97 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 NHLRC4P0CG21 123 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-204ENST00000419671 ZNF415Q09FC8 603 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 V9GYY9 64 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 K7EMI3 77 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 M0R2P5 195 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 POLR2KP53803 58 aaKnown RBP5.89□□□□□ -1.47
COL12A1-204ENST00000419671 CMC4P56277 68 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-204ENST00000419671 ZNF56Q15929 161 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 LGALS9BQ3B8N2 356 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 BVES-AS1Q5T3Y7 98 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 LGALS9CQ6DKI2 356 aa5.89□□□□□ -1.47
COL12A1-204ENST00000419671 A8MZ25 164 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 NUDT3O95989 172 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 PIK3CD-AS1Q5SR53 167 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 ZFAND6Q6FIF0 208 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 ST20Q9HBF5 79 aa5.88□□□□□ -1.47
COL12A1-204ENST00000419671 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
COL12A1-204ENST00000419671 IGHV3OR16-12A0A075B7B8 117 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TRBV6-5A0A0K0K1A5 114 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TRBV27A0A0K0K1C4 114 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 ORMDL2Q53FV1 153 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 C6orf226Q5I0X4 101 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 C12orf54Q6X4T0 127 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TRRAPQ9Y4A5 3859 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 IGHV3-73A0A0B4J1V6 119 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 SDHAF1A6NFY7 115 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 A8MWV9 139 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 RPL35AP18077 110 aaKnown RBP5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TMEM97Q5BJF2 176 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 CSNK1G2-AS1Q8NCQ2 148 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 DEFB104AQ8WTQ1 72 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TP73-AS1Q9UF72 201 aa5.87□□□□□ -1.47
COL12A1-204ENST00000419671 TINCRA0A1B0GVN0 87 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 ATP5LO75964 103 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 MALP21145 153 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 MPV17L2Q567V2 206 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 CFAP126Q5VTH2 177 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 BAALCQ8WXS3 180 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 EDA2RQ9HAV5 297 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 FLNBO75369 2602 aaKnown RBP5.86□□□□□ -1.47
COL12A1-204ENST00000419671 VCYO14598 125 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 PRSS1P07477 247 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 P0DMU3 169 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 FAM231AP0DMU4 169 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 FAM231CP0DMU5 169 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 C2orf66Q6UXQ4 117 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 Q6ZSN1 163 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 Q9UF83 564 aa5.86□□□□□ -1.47
COL12A1-204ENST00000419671 ATRQ13535 2644 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 PLAC8L1A1L4L8 177 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 CYSRT1A8MQ03 144 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 J3KT08 172 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 INSL3P51460 131 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 C9orf66Q5T8R8 295 aa5.85□□□□□ -1.47
COL12A1-204ENST00000419671 TMEM263Q8WUH6 116 aaKnown RBP5.85□□□□□ -1.47
COL12A1-204ENST00000419671 FBN1P35555 2871 aaKnown RBP5.85□□□□□ -1.47
COL12A1-204ENST00000419671 NOTCH3Q9UM47 2321 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 A0A1B0GX51 115 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 A6NDN8 102 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 ZNRF2Q8NHG8 242 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 TMEM101Q96IK0 257 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 SCGB3A1Q96QR1 104 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 KIR2DL4Q99706 377 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 SPANXB1Q9NS25 103 aaPredicted RBP5.84□□□□□ -1.47
COL12A1-204ENST00000419671 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
COL12A1-204ENST00000419671 TSHBP01222 138 aa5.84□□□□□ -1.48
COL12A1-204ENST00000419671 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.48
COL12A1-204ENST00000419671 GTSCR1Q86UQ5 136 aa5.84□□□□□ -1.48
COL12A1-204ENST00000419671 PRO0628Q9UI54 55 aa5.84□□□□□ -1.48
COL12A1-204ENST00000419671 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms