RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CACNA1CQ13936 2221 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 TRBV6-4A0A1B0GX49 114 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 F8W1H4 67 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 SNAPC5O75971 98 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 IGHV3-33P01772 117 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 IGKCP01834 107 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 AKAIN1P0CW23 69 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 ADCYAP1P18509 176 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 GUCA1AP43080 201 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 NCBP2-AS2Q69YL0 99 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 C9orf62Q8N4C0 152 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 PDCD10Q9BUL8 212 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 CDC42SE1Q9NRR8 79 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 TAS2R8Q9NYW2 309 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 CCDC167Q9P0B6 97 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 BOKQ9UMX3 212 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 NOP16Q9Y3C1 178 aaKnown RBP1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 V9GYH0 126 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 CR1P17927 2039 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 FANCMQ8IYD8 2048 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 SCN3AQ9NY46 2000 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 FREM1Q5H8C1 2179 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 MED13Q9UHV7 2174 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 CCL25O15444 150 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 HYPMO75409 117 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 MPC2O95563 127 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 PIPP12273 146 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 COX7CP15954 63 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 FGF7P21781 194 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 POLR2JP52435 117 aaKnown RBP1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 LINC01545Q5VT33 79 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 ATOH7Q8N100 152 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 KCNRGQ8N5I3 272 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 ORMDL1Q9P0S3 153 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 KIAA1549LQ6ZVL6 1849 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 ALPK2Q86TB3 2170 aa1.21□□□□□ -2.22
HMGB1P49-201ENST00000418882 TNS1Q9HBL0 1735 aaKnown RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 MYOFQ9NZM1 2061 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 CHD3Q12873 2000 aaKnown RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 MUC4Q99102 2169 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 J3QLW9 94 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 KLF7O75840 302 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 NMBP08949 121 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 SNRPGP62308 76 aaKnown RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 BTG2P78543 158 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 DCDP81605 110 aaKnown RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 RPS27LQ71UM5 84 aaKnown RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 VSTM2AQ8TAG5 236 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 PAPPA2Q9BXP8 1791 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 RTTNQ86VV8 2226 aa1.2□□□□□ -2.22
HMGB1P49-201ENST00000418882 ATG2AQ2TAZ0 1938 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 NCOA6Q14686 2063 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 SPAG17Q6Q759 2223 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 TRAV17A0A0B4J275 112 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 CXorf51AA0A1B0GTR3 108 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 LOC285095A0A1B0GVY8 99 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 A0A1W2PRS3 328 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 GNGT2O14610 69 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 NUPR1O60356 82 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 CFDP00746 253 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 IGLV3-1P01715 115 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 LINC00032P0C843 101 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 PIRTP0C851 137 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 SMIM6P0DI80 62 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 SLC25A6P12236 298 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 PPP3R1P63098 170 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 C12orf73Q69YU5 71 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 Q6ZS92 163 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 DYNLRB2Q8TF09 96 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 PPP3R2Q96LZ3 170 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 PSMG3Q9BT73 122 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 RERGLQ9H628 205 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 NDUFA12Q9UI09 145 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 SCP2D1Q9UJQ7 156 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 KLK9Q9UKQ9 250 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 DOCK11Q5JSL3 2073 aa1.19□□□□□ -2.22
HMGB1P49-201ENST00000418882 FLG2Q5D862 2391 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 UNC13CQ8NB66 2214 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 TRGV2A0A075B6R0 118 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 OOSP1A8MZH6 123 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 MCRIP1C9JLW8 97 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 H3BRM9 83 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 PDCD5O14737 125 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 HCRTO43612 131 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 YPEL1O60688 119 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 PPYP01298 95 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 S100A8P05109 93 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 IL5P05113 134 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 RBP2P50120 134 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 CATR1Q13166 79 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 IQCJQ1A5X6 159 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 FAM74A1Q5RGS3 127 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 LYPD5Q6UWN5 251 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 Q6ZSA8 131 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 DEFB106AQ8N104 65 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 C10orf105Q8TEF2 133 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms