RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 TMEM243Q9BU79 118 aa13□□□□□ -0.33
SLC39A1-206ENST00000417348 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
SLC39A1-206ENST00000417348 LAMTOR2Q9Y2Q5 125 aa13□□□□□ -0.33
SLC39A1-206ENST00000417348 IGHV3-30P01768 117 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 IGHV3-30-3P0DP02 117 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 IGHV3-30-5P0DP03 117 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 NRACQ8N912 160 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 RMI2Q96E14 147 aa12.99□□□□□ -0.33
SLC39A1-206ENST00000417348 VCYO14598 125 aa12.98□□□□□ -0.33
SLC39A1-206ENST00000417348 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
SLC39A1-206ENST00000417348 COX19Q49B96 90 aa12.98□□□□□ -0.33
SLC39A1-206ENST00000417348 EPPK1P58107 5090 aaKnown RBP12.98□□□□□ -0.33
SLC39A1-206ENST00000417348 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 S100PP25815 95 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 CKS2P33552 79 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 AMTP48728 403 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 SVBPQ8N300 66 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
SLC39A1-206ENST00000417348 APCSP02743 223 aa12.96□□□□□ -0.33
SLC39A1-206ENST00000417348 PMCHP20382 165 aa12.96□□□□□ -0.33
SLC39A1-206ENST00000417348 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
SLC39A1-206ENST00000417348 TNP2Q05952 138 aa12.96□□□□□ -0.33
SLC39A1-206ENST00000417348 EREGO14944 169 aa12.95□□□□□ -0.34
SLC39A1-206ENST00000417348 SNAPINO95295 136 aa12.95□□□□□ -0.34
SLC39A1-206ENST00000417348 ZNF25P17030 456 aaPredicted RBP12.95□□□□□ -0.34
SLC39A1-206ENST00000417348 MPV17L2Q567V2 206 aa12.95□□□□□ -0.34
SLC39A1-206ENST00000417348 ORMDL3Q8N138 153 aa12.95□□□□□ -0.34
SLC39A1-206ENST00000417348 PRSS47A8MTI9 375 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 UBE2L6O14933 153 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 ESDP10768 282 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 RBX1P62877 108 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 SMAGPQ0VAQ4 97 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 MIAQ16674 131 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 KIR2DL4Q99706 377 aa12.94□□□□□ -0.34
SLC39A1-206ENST00000417348 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
SLC39A1-206ENST00000417348 KLK12Q9UKR0 248 aa12.93□□□□□ -0.34
SLC39A1-206ENST00000417348 TNFRSF6BO95407 300 aa12.92□□□□□ -0.34
SLC39A1-206ENST00000417348 CDPF1Q6NVV7 123 aa12.92□□□□□ -0.34
SLC39A1-206ENST00000417348 PKD1P98161 4303 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 D6R8Y8 96 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 TSHBP01222 138 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 CRPP02741 224 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 TMEM136Q6ZRR5 245 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 Q8N3U1 123 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 GNB1LQ9BYB4 327 aa12.91□□□□□ -0.34
SLC39A1-206ENST00000417348 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 K7EMI3 77 aa12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 PSCAO43653 123 aa12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 ANGP03950 147 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 GAGE6Q13070 117 aa12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 CSDC2Q9Y534 153 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-206ENST00000417348 A0A087WTM6 91 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 APOC3P02656 99 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 MT-ND6P03923 174 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 ENHOQ6UWT2 76 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 Q8N976 141 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 SMIM2Q9BVW6 85 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 RPS10P5Q9NQ39 176 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
SLC39A1-206ENST00000417348 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 C20orf203Q8NBC4 194 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 TMEM18Q96B42 140 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 C1orf43Q9BWL3 253 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 Q9HAA7 133 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 BIRC6Q9NR09 4857 aa12.88□□□□□ -0.35
SLC39A1-206ENST00000417348 FCER1GP30273 86 aa12.87□□□□□ -0.35
SLC39A1-206ENST00000417348 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
SLC39A1-206ENST00000417348 REG3AQ06141 175 aa12.86□□□□□ -0.35
SLC39A1-206ENST00000417348 AMMECR1LQ6DCA0 310 aa12.86□□□□□ -0.35
SLC39A1-206ENST00000417348 TIMM21Q9BVV7 248 aa12.86□□□□□ -0.35
SLC39A1-206ENST00000417348 PKHD1P08F94 4074 aa12.85□□□□□ -0.35
SLC39A1-206ENST00000417348 NPYP01303 97 aa12.85□□□□□ -0.35
SLC39A1-206ENST00000417348 FGF6P10767 208 aa12.85□□□□□ -0.35
SLC39A1-206ENST00000417348 LINC00269Q8N2A0 174 aa12.85□□□□□ -0.35
SLC39A1-206ENST00000417348 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
SLC39A1-206ENST00000417348 TMEM101Q96IK0 257 aa12.84□□□□□ -0.35
SLC39A1-206ENST00000417348 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
SLC39A1-206ENST00000417348 IGKV2D-24A0A075B6R9 120 aa12.83□□□□□ -0.36
SLC39A1-206ENST00000417348 CCL25O15444 150 aa12.83□□□□□ -0.36
SLC39A1-206ENST00000417348 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
SLC39A1-206ENST00000417348 DNAH11Q96DT5 4516 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 IGKV2-29A2NJV5 120 aaPredicted RBP12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 RAB5AP20339 215 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 G0S2P27469 103 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 C14orf177Q52M58 125 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 Q8N814 137 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 OR5A1Q8NGJ0 315 aa12.81□□□□□ -0.36
SLC39A1-206ENST00000417348 RNASEKQ6P5S7 137 aaKnown RBP12.8□□□□□ -0.36
SLC39A1-206ENST00000417348 Q8N8P6 123 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms