RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 GATD1Q8NB37 220 aa11.59□□□□□ -0.55
CPNE1-210ENST00000416778 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
CPNE1-210ENST00000416778 IGLV4-60A0A075B6I1 120 aa11.58□□□□□ -0.56
CPNE1-210ENST00000416778 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-210ENST00000416778 REG3AQ06141 175 aa11.58□□□□□ -0.56
CPNE1-210ENST00000416778 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
CPNE1-210ENST00000416778 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
CPNE1-210ENST00000416778 HLA-DQA1P01909 254 aa11.57□□□□□ -0.56
CPNE1-210ENST00000416778 FAM231DQ6ZW35 169 aa11.57□□□□□ -0.56
CPNE1-210ENST00000416778 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
CPNE1-210ENST00000416778 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
CPNE1-210ENST00000416778 IGLV10-54A0A075B6I4 117 aa11.55□□□□□ -0.56
CPNE1-210ENST00000416778 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
CPNE1-210ENST00000416778 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
CPNE1-210ENST00000416778 COTL1Q14019 142 aa11.55□□□□□ -0.56
CPNE1-210ENST00000416778 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
CPNE1-210ENST00000416778 A8MWL6 223 aa11.54□□□□□ -0.56
CPNE1-210ENST00000416778 KRTAP10-4P60372 401 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-210ENST00000416778 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
CPNE1-210ENST00000416778 NDUFS6O75380 124 aaKnown RBP11.53□□□□□ -0.56
CPNE1-210ENST00000416778 AMTP48728 403 aa11.53□□□□□ -0.56
CPNE1-210ENST00000416778 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
CPNE1-210ENST00000416778 CEBPGP53567 150 aa11.52□□□□□ -0.57
CPNE1-210ENST00000416778 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.57
CPNE1-210ENST00000416778 SMIM15Q7Z3B0 74 aa11.52□□□□□ -0.57
CPNE1-210ENST00000416778 EIF5A2Q9GZV4 153 aaKnown RBP11.52□□□□□ -0.57
CPNE1-210ENST00000416778 UBE2L6O14933 153 aa11.51□□□□□ -0.57
CPNE1-210ENST00000416778 CT83Q5H943 113 aa11.51□□□□□ -0.57
CPNE1-210ENST00000416778 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
CPNE1-210ENST00000416778 LINC01551Q86U37 167 aa11.5□□□□□ -0.57
CPNE1-210ENST00000416778 FAM210AQ96ND0 272 aa11.5□□□□□ -0.57
CPNE1-210ENST00000416778 NCR2O95944 276 aa11.49□□□□□ -0.57
CPNE1-210ENST00000416778 SLPIP03973 132 aa11.49□□□□□ -0.57
CPNE1-210ENST00000416778 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
CPNE1-210ENST00000416778 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
CPNE1-210ENST00000416778 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
CPNE1-210ENST00000416778 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
CPNE1-210ENST00000416778 KRTAP29-1A8MX34 341 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-210ENST00000416778 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
CPNE1-210ENST00000416778 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
CPNE1-210ENST00000416778 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
CPNE1-210ENST00000416778 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 H7C423 109 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 PANO1I0J062 215 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
CPNE1-210ENST00000416778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-210ENST00000416778 HIGD1CA8MV81 97 aa11.46□□□□□ -0.57
CPNE1-210ENST00000416778 TMEM191AQ9H0A3 160 aa11.46□□□□□ -0.57
CPNE1-210ENST00000416778 LRP1Q07954 4544 aaKnown RBP11.45□□□□□ -0.58
CPNE1-210ENST00000416778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-210ENST00000416778 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-210ENST00000416778 GAGE12HA6NDE8 117 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 I3L3M4 83 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 J3QL48 77 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 PMCHP20382 165 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
CPNE1-210ENST00000416778 FGF6P10767 208 aa11.44□□□□□ -0.58
CPNE1-210ENST00000416778 RAB4AP20338 218 aa11.44□□□□□ -0.58
CPNE1-210ENST00000416778 POLR2KP53803 58 aaKnown RBP11.44□□□□□ -0.58
CPNE1-210ENST00000416778 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
CPNE1-210ENST00000416778 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
CPNE1-210ENST00000416778 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 APCSP02743 223 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 ESDP10768 282 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
CPNE1-210ENST00000416778 TMEM241Q24JQ0 296 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
CPNE1-210ENST00000416778 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 V9GYV3 84 aa11.43□□□□□ -0.58
CPNE1-210ENST00000416778 C9JQL5 133 aa11.42□□□□□ -0.58
CPNE1-210ENST00000416778 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
CPNE1-210ENST00000416778 C15orf56Q8N910 161 aa11.42□□□□□ -0.58
CPNE1-210ENST00000416778 CHCHD10Q8WYQ3 142 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-210ENST00000416778 TSHBP01222 138 aa11.41□□□□□ -0.58
CPNE1-210ENST00000416778 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
CPNE1-210ENST00000416778 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
CPNE1-210ENST00000416778 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
CPNE1-210ENST00000416778 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
CPNE1-210ENST00000416778 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-210ENST00000416778 RPL23P62829 140 aaKnown RBP11.4□□□□□ -0.58
CPNE1-210ENST00000416778 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
CPNE1-210ENST00000416778 ISOC2Q96AB3 205 aa11.4□□□□□ -0.58
CPNE1-210ENST00000416778 TRBV27A0A0K0K1C4 114 aa11.39□□□□□ -0.59
CPNE1-210ENST00000416778 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-210ENST00000416778 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
CPNE1-210ENST00000416778 RIGQ13278 110 aa11.39□□□□□ -0.59
CPNE1-210ENST00000416778 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
CPNE1-210ENST00000416778 MRAP2Q96G30 205 aa11.39□□□□□ -0.59
CPNE1-210ENST00000416778 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
CPNE1-210ENST00000416778 SRSF3P84103 164 aaKnown RBP11.38□□□□□ -0.59
CPNE1-210ENST00000416778 FOXI1Q12951 378 aa11.38□□□□□ -0.59
CPNE1-210ENST00000416778 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
CPNE1-210ENST00000416778 TMEM242Q9NWH2 141 aa11.38□□□□□ -0.59
CPNE1-210ENST00000416778 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
CPNE1-210ENST00000416778 VCYO14598 125 aa11.37□□□□□ -0.59
CPNE1-210ENST00000416778 OXTP01178 125 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms