RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SONP18583 2426 aaKnown RBP10.96□□□□□ -0.66
NCKIPSD-204ENST00000416649 C9orf139Q6ZV77 190 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 BPESC1Q9GZL8 116 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
NCKIPSD-204ENST00000416649 WNK1Q9H4A3 2382 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 EBI3Q14213 229 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 FAM110DQ8TAY7 271 aaPredicted RBP10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 BBC3Q96PG8 261 aaPredicted RBP10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 A0A087WW49 117 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 FAM240AA0A1B0GVK7 77 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 Q8N9W7 124 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
NCKIPSD-204ENST00000416649 FBN2P35556 2912 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 LST1O00453 97 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
NCKIPSD-204ENST00000416649 RS1O15537 224 aa10.92□□□□□ -0.66
NCKIPSD-204ENST00000416649 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-204ENST00000416649 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
NCKIPSD-204ENST00000416649 NOTCH2Q04721 2471 aa10.92□□□□□ -0.66
NCKIPSD-204ENST00000416649 SMCR5Q8TEV8 140 aa10.92□□□□□ -0.66
NCKIPSD-204ENST00000416649 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 TRBV27A0A0K0K1C4 114 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 OVOL1O14753 267 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 IGKV3-20P01619 116 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 UNQ9165/PRO28630Q6UXU0 137 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 UQCRQO14949 82 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 LITAFQ99732 161 aa10.91□□□□□ -0.66
NCKIPSD-204ENST00000416649 ODF3BA8MYP8 253 aa10.9□□□□□ -0.66
NCKIPSD-204ENST00000416649 CD28P10747 220 aa10.9□□□□□ -0.66
NCKIPSD-204ENST00000416649 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
NCKIPSD-204ENST00000416649 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.66
NCKIPSD-204ENST00000416649 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 IGHV3-11P01762 117 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 Q8N6K4 173 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 J3KT08 172 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 LINC01600Q96MT4 127 aa10.89□□□□□ -0.67
NCKIPSD-204ENST00000416649 TRBV12-3P01733 135 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 MED14OSP0DP75 135 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 RHOHQ15669 191 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 MIAQ16674 131 aa10.88□□□□□ -0.67
NCKIPSD-204ENST00000416649 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 TRBV7-1A0A0A6YYK4 115 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 U3KQE9 123 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 A0A0J9YX75 114 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 hADV29S1A0JD25 119 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 LINC00526Q96FQ7 95 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 NBPF19A0A087WUL8 3843 aa10.87□□□□□ -0.67
NCKIPSD-204ENST00000416649 DEFB121Q5J5C9 76 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 LINC00643Q86TS7 51 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 IMUPQ9GZP8 106 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 TRAV12-2A0A075B6T6 113 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 M0R1W7 72 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 MAPK1IP1LQ8NDC0 245 aa10.86□□□□□ -0.67
NCKIPSD-204ENST00000416649 ACANP16112 2415 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 M0QY20 66 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 EDN2P20800 178 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 DAZ2Q13117 558 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 DAZ4Q86SG3 579 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 CCL19Q99731 98 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 DAZ1Q9NQZ3 744 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 DAZ3Q9NR90 486 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 ACYP1P07311 99 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
NCKIPSD-204ENST00000416649 NXPH4O95158 308 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 HTN1P15515 57 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 LY6EQ16553 131 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 MINOS1Q5TGZ0 78 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
NCKIPSD-204ENST00000416649 TRAV13-1A0A0B4J241 112 aa10.83□□□□□ -0.68
NCKIPSD-204ENST00000416649 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
NCKIPSD-204ENST00000416649 TRBV6-5A0A0K0K1A5 114 aa10.83□□□□□ -0.68
NCKIPSD-204ENST00000416649 COX7CP15954 63 aa10.83□□□□□ -0.68
NCKIPSD-204ENST00000416649 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGHV4-61A0A0C4DH41 118 aa10.82□□□□□ -0.68
NCKIPSD-204ENST00000416649 LRRC75A-AS1Q8N1F1 130 aa10.82□□□□□ -0.68
NCKIPSD-204ENST00000416649 FASNP49327 2511 aaKnown RBP10.82□□□□□ -0.68
NCKIPSD-204ENST00000416649 SOCS3O14543 225 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 BAALC-AS2P0C853 105 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 LMO4P61968 165 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 DCANP1Q8TF63 244 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms