RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TMEM70Q9BUB7 260 aa9.87□□□□□ -0.83
LIMS1-206ENST00000414829 Q9HAA7 133 aa9.87□□□□□ -0.83
LIMS1-206ENST00000414829 TRBV27A0A0K0K1C4 114 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 PHOX2AO14813 284 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 SUMO2P61956 95 aaKnown RBP9.86□□□□□ -0.83
LIMS1-206ENST00000414829 TNP2Q05952 138 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
LIMS1-206ENST00000414829 VCYO14598 125 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
LIMS1-206ENST00000414829 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
LIMS1-206ENST00000414829 MPV17L2Q567V2 206 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 SVBPQ8N300 66 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 LAMTOR2Q9Y2Q5 125 aa9.85□□□□□ -0.83
LIMS1-206ENST00000414829 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 SNAPINO95295 136 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 FCER1GP30273 86 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
LIMS1-206ENST00000414829 GAGE6Q13070 117 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
LIMS1-206ENST00000414829 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
LIMS1-206ENST00000414829 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
LIMS1-206ENST00000414829 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
LIMS1-206ENST00000414829 RBX1P62877 108 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 MIAQ16674 131 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 COX19Q49B96 90 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 ATRAIDQ6UW56 229 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 Q8N3U1 123 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 NRACQ8N912 160 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 CLRN3Q8NCR9 226 aa9.83□□□□□ -0.84
LIMS1-206ENST00000414829 D6R8Y8 96 aa9.82□□□□□ -0.84
LIMS1-206ENST00000414829 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
LIMS1-206ENST00000414829 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
LIMS1-206ENST00000414829 DNAH10Q8IVF4 4471 aa9.82□□□□□ -0.84
LIMS1-206ENST00000414829 DNAH2Q9P225 4427 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 APOC3P02656 99 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 CDPF1Q6NVV7 123 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 Q8N976 141 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 PRR34Q9NV39 138 aa9.81□□□□□ -0.84
LIMS1-206ENST00000414829 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 TSHBP01222 138 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 HLA-DQA1P01909 254 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 PRELID3AQ96N28 172 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
LIMS1-206ENST00000414829 FAT2Q9NYQ8 4349 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 A0A087WTM6 91 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 MT-ND6P03923 174 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
LIMS1-206ENST00000414829 FGF6P10767 208 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 ESDP10768 282 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 REG3AQ06141 175 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
LIMS1-206ENST00000414829 LINC00269Q8N2A0 174 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 HECTD4Q9Y4D8 3996 aa9.78□□□□□ -0.84
LIMS1-206ENST00000414829 NPYP01303 97 aa9.77□□□□□ -0.85
LIMS1-206ENST00000414829 RAB5AP20339 215 aa9.77□□□□□ -0.85
LIMS1-206ENST00000414829 SPATA12Q7Z6I5 190 aa9.77□□□□□ -0.85
LIMS1-206ENST00000414829 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.85
LIMS1-206ENST00000414829 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
LIMS1-206ENST00000414829 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
LIMS1-206ENST00000414829 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
LIMS1-206ENST00000414829 DNAH17Q9UFH2 4485 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
LIMS1-206ENST00000414829 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
LIMS1-206ENST00000414829 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 ENHOQ6UWT2 76 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
LIMS1-206ENST00000414829 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
LIMS1-206ENST00000414829 K7EMI3 77 aa9.75□□□□□ -0.85
LIMS1-206ENST00000414829 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
LIMS1-206ENST00000414829 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
LIMS1-206ENST00000414829 EPPK1P58107 5090 aaKnown RBP9.75□□□□□ -0.85
LIMS1-206ENST00000414829 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
LIMS1-206ENST00000414829 PRSS47A8MTI9 375 aa9.74□□□□□ -0.85
LIMS1-206ENST00000414829 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
LIMS1-206ENST00000414829 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
LIMS1-206ENST00000414829 G0S2P27469 103 aa9.73□□□□□ -0.85
LIMS1-206ENST00000414829 Q8N814 137 aa9.73□□□□□ -0.85
LIMS1-206ENST00000414829 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
LIMS1-206ENST00000414829 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
LIMS1-206ENST00000414829 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.86
LIMS1-206ENST00000414829 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms