RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 ARPC5O15511 151 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 PFDN1O60925 122 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 SULT1A2P50226 295 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 CFAP161Q6P656 301 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 C11orf52Q96A22 123 aa7.56□□□□□ -1.2
LIMS2-210ENST00000413578 A0A1B0GV50 99 aa7.55□□□□□ -1.2
LIMS2-210ENST00000413578 CACNG7P62955 275 aa7.55□□□□□ -1.2
LIMS2-210ENST00000413578 COTL1Q14019 142 aa7.55□□□□□ -1.2
LIMS2-210ENST00000413578 FAM213BQ8TBF2 198 aa7.55□□□□□ -1.2
LIMS2-210ENST00000413578 TPPP3Q9BW30 176 aa7.55□□□□□ -1.2
LIMS2-210ENST00000413578 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
LIMS2-210ENST00000413578 AMTP48728 403 aa7.54□□□□□ -1.2
LIMS2-210ENST00000413578 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
LIMS2-210ENST00000413578 KCNRGQ8N5I3 272 aa7.54□□□□□ -1.2
LIMS2-210ENST00000413578 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
LIMS2-210ENST00000413578 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
LIMS2-210ENST00000413578 CHCHD10Q8WYQ3 142 aaPredicted RBP7.54□□□□□ -1.2
LIMS2-210ENST00000413578 F2Z2F3 143 aa7.53□□□□□ -1.2
LIMS2-210ENST00000413578 UBE2L6O14933 153 aa7.53□□□□□ -1.2
LIMS2-210ENST00000413578 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
LIMS2-210ENST00000413578 FOXI1Q12951 378 aa7.53□□□□□ -1.2
LIMS2-210ENST00000413578 REG3GQ6UW15 175 aa7.53□□□□□ -1.2
LIMS2-210ENST00000413578 MUC2Q02817 5179 aa7.52□□□□□ -1.2
LIMS2-210ENST00000413578 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 NTF3P20783 257 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 ZNF345Q14585 488 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 CENPWQ5EE01 88 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 Q6ZNX1 250 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
LIMS2-210ENST00000413578 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 H2AFB1P0C5Y9 115 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 CTRLP40313 264 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 SMIM12Q96EX1 92 aa7.51□□□□□ -1.21
LIMS2-210ENST00000413578 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
LIMS2-210ENST00000413578 H7C423 109 aa7.5□□□□□ -1.21
LIMS2-210ENST00000413578 CCL20P78556 96 aa7.5□□□□□ -1.21
LIMS2-210ENST00000413578 Q6ZRP5 223 aa7.5□□□□□ -1.21
LIMS2-210ENST00000413578 BATF3Q9NR55 127 aa7.5□□□□□ -1.21
LIMS2-210ENST00000413578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.49□□□□□ -1.21
LIMS2-210ENST00000413578 TRAV1-1A0A0B4J248 108 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 IGKV2-29A2NJV5 120 aaPredicted RBP7.49□□□□□ -1.21
LIMS2-210ENST00000413578 XKRY2A2RUG3 117 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 SMLR1H3BR10 107 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 NCR2O95944 276 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 FGF6P10767 208 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 MANBALQ9NQG1 85 aa7.49□□□□□ -1.21
LIMS2-210ENST00000413578 RAB19A4D1S5 217 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 IFNA1P01562 189 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 OR5A1Q8NGJ0 315 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 GNG13Q9P2W3 67 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 PKIGQ9Y2B9 76 aa7.48□□□□□ -1.21
LIMS2-210ENST00000413578 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
LIMS2-210ENST00000413578 ZNF25P17030 456 aaPredicted RBP7.47□□□□□ -1.21
LIMS2-210ENST00000413578 GNG4P50150 75 aa7.47□□□□□ -1.21
LIMS2-210ENST00000413578 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
LIMS2-210ENST00000413578 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
LIMS2-210ENST00000413578 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
LIMS2-210ENST00000413578 CARD19Q96LW7 228 aa7.47□□□□□ -1.21
LIMS2-210ENST00000413578 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 CCL25O15444 150 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 BCL2L11O43521 198 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 APCSP02743 223 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 XCL1P47992 114 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 PTTG1IPP53801 180 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
LIMS2-210ENST00000413578 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
LIMS2-210ENST00000413578 ESDP10768 282 aa7.45□□□□□ -1.22
LIMS2-210ENST00000413578 TWIST1Q15672 202 aa7.45□□□□□ -1.22
LIMS2-210ENST00000413578 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
LIMS2-210ENST00000413578 MEF2BQ02080 365 aaPredicted RBP7.44□□□□□ -1.22
LIMS2-210ENST00000413578 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
LIMS2-210ENST00000413578 BIN3Q9NQY0 253 aa7.44□□□□□ -1.22
LIMS2-210ENST00000413578 TRBV6-5A0A0K0K1A5 114 aa7.43□□□□□ -1.22
LIMS2-210ENST00000413578 PDE6DO43924 150 aa7.43□□□□□ -1.22
LIMS2-210ENST00000413578 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
LIMS2-210ENST00000413578 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
LIMS2-210ENST00000413578 KANTRA0A1W2PQU2 76 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 I3L3M4 83 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 K7EN84 100 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 TSHBP01222 138 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 CAMPP49913 170 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 EIF5AP63241 154 aaKnown RBP7.42□□□□□ -1.22
LIMS2-210ENST00000413578 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
LIMS2-210ENST00000413578 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
LIMS2-210ENST00000413578 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 MED9Q9NWA0 146 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 PSORS1C2Q9UIG4 136 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms